Full information on isolate SID 3783 (id:77)

Provenance/primary metadata

id
77
isolate
SID 3783
alias
SID 3783/99
country
Malaysia
continent
Asia
year
1999
species
Burkholderia pseudomallei
source
human
sender
Tyrone Pitt, Central Public Health Laboratory, London, UK
curator
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update history
7 updates show details
date entered
2016-02-01
datestamp
2022-01-12

Publication (1)

  • Godoy D, Randle G, Simpson AJ, Aanensen DM, Pitt TL, Kinoshita R, Spratt BG (2003). Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei. J Clin Microbiol 41:2068-79

Sequence bin

contigs
133
total length
7,097,866 bp
max length
340,933 bp
mean length
53,368 bp
N50
86,504
L50
22
N90
27,663
L90
73
N95
20,043
L95
88
%GC
68.23
Ns
591
gaps
7
loci tagged
5,577

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
cgMLST4090405899

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Burkholderia pseudomallei Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia pseudomallei 100%

Analysis performed: 2022-11-24

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

Schemes and loci

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