Full information on isolate NCTC 8016 (id:73)

Provenance/primary metadata

id
73
isolate
NCTC 8016
alias
5
country
Australia
continent
Oceania
year
1949
species
Burkholderia pseudomallei
source
animal
sender
Tyrone Pitt, Central Public Health Laboratory, London, UK
curator
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update history
5 updates show details
date entered
2016-02-01
datestamp
2022-08-12

Publication (1)

  • Godoy D, Randle G, Simpson AJ, Aanensen DM, Pitt TL, Kinoshita R, Spratt BG (2003). Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei. J Clin Microbiol 41:2068-79

Sequence bin

contigs
882
total length
7,073,406 bp
max length
118,108 bp
mean length
8,020 bp
N50
13,600
L50
135
N90
3,452
L90
535
N95
2,258
L95
661
%GC
68.05
Ns
1638
gaps
20
loci tagged
4,909

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST534788
cgMLST4090390695

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Burkholderia pseudomallei Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia pseudomallei 100%

Analysis performed: 2022-11-24

Schemes and loci

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