Full information on isolate MSHR0239 (id:217)

Provenance/primary metadata

id
217
isolate
MSHR0239
alias
MSHR239
country
Australia
continent
Oceania
region
Queensland
year
1993
species
Burkholderia pseudomallei
source
human
sender
Bart Currie, Menzies School of Health Research, Darwin, Australia
curator
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update history
5 updates show details
date entered
2016-02-01
datestamp
2022-01-12

Sequence bin

contigs
167
total length
7,160,745 bp
max length
433,463 bp
mean length
42,879 bp
N50
84,000
L50
29
N90
23,908
L90
88
N95
13,246
L95
108
%GC
68.19
Ns
1411
gaps
19
loci tagged
5,546

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
cgMLST4090408199

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Burkholderia pseudomallei Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia pseudomallei 100%

Analysis performed: 2021-07-14

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

Schemes and loci

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