Full information on isolate MK441 (id:107)

Provenance/primary metadata

id
107
isolate
MK441
alias
13
country
Philippines
continent
Asia
year
1990
species
Burkholderia pseudomallei
source
animal
animal source
monkey
sender
Tyrone Pitt, Central Public Health Laboratory, London, UK
curator
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update history
5 updates show details
date entered
2016-02-01
datestamp
2022-01-12

Publication (1)

  • Godoy D, Randle G, Simpson AJ, Aanensen DM, Pitt TL, Kinoshita R, Spratt BG (2003). Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei. J Clin Microbiol 41:2068-79

Sequence bin

contigs
116
total length
7,041,801 bp
max length
362,035 bp
mean length
60,706 bp
N50
128,763
L50
19
N90
34,139
L90
55
N95
20,305
L95
69
%GC
68.31
Ns
353
gaps
7
loci tagged
5,664

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST535298
cgMLST4090408099

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Burkholderia pseudomallei Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia pseudomallei 100%

Analysis performed: 2022-11-24

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

Schemes and loci

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Tools

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