Full information on isolate PTrob_wgs (id:2719)

Provenance/primary metadata

id
2719
isolate
PTrob_wgs
alias
ospA serotype 4
country
Slovenia
continent
Europe
species
Borrelia bavariensis
year
1988
source
human
detailed source
skin
sender
Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
curator
Auto Tagger
update history
14 updates show details
date entered
2020-02-17
datestamp
2023-01-27

Sequence bin

contigs
32
total length
1,294,116 bp
max length
232,197 bp
mean length
40,442 bp
N50
132,397
L50
4
N90
24,446
L90
15
N95
21,306
L95
18
%GC
27.96
Ns
0
gaps
0
loci tagged
811

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Borreliella garinii Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii 98%

Analysis performed: 2022-09-01

Schemes and loci

Navigate and select schemes within tree to display allele designations

Tools

Export:
Analysis: