Full information on isolate Prm7564-11_wgs (id:2716)

Provenance/primary metadata

id
2716
isolate
Prm7564-11_wgs
country
Russia [Europe]
continent
Europe
region
Perm krai, Cherdyn
species
Borrelia bavariensis
year
2011
source
tick
detailed source
Ixodes persulcatus
sender
Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
curator
Auto Tagger
update history
16 updates show details
date entered
2020-02-17
datestamp
2023-01-27

Sequence bin

contigs
51
total length
1,387,681 bp
max length
405,636 bp
mean length
27,210 bp
N50
213,132
L50
3
N90
11,828
L90
16
N95
5,403
L95
26
%GC
27.83
Ns
0
gaps
0
loci tagged
802

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Borreliella garinii Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii 100%

Analysis performed: 2022-09-01

Schemes and loci

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