Full information on isolate PRab_wgs (id:2713)
Provenance/primary metadata
- id
- 2713
- isolate
- PRab_wgs
- alias
- ospA serotype 4
- country
- Austria
- continent
- Europe
- region
- Villach
- species
- Borrelia bavariensis
- year
- 1994
- source
- human
- detailed source
- synovia, arthritis
- sender
- Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
- curator
- Auto Tagger
- update history
- 14 updates show details
- date entered
- 2020-02-17
- datestamp
- 2023-01-27
Sequence bin
- contigs
- 59
- total length
- 1,250,677 bp
- max length
- 203,002 bp
- mean length
- 21,198 bp
- N50
- 52,347
- L50
- 5
- N90
- 9,917
- L90
- 28
- N95
- 4,552
- L95
- 37
- %GC
- 27.73
- Ns
- 0
- gaps
- 0
- loci tagged
- 800
Analysis
rMLST species identification
| Rank | Taxon | Taxonomy | Support | Matches |
|---|---|---|---|---|
| SPECIES | Borreliella garinii | Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii | 100% |
Analysis performed: 2022-09-01
Schemes and loci
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