Full information on isolate J-20T_wgs (id:2707)
Provenance/primary metadata
- id
- 2707
- isolate
- J-20T_wgs
- country
- Japan
- continent
- Asia
- species
- Borrelia bavariensis
- source
- human
- sender
- Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
- curator
- Auto Tagger
- update history
- 13 updates show details
- date entered
- 2020-02-17
- datestamp
- 2023-01-27
Sequence bin
- contigs
- 43
- total length
- 1,306,994 bp
- max length
- 467,090 bp
- mean length
- 30,396 bp
- N50
- 222,819
- L50
- 2
- N90
- 12,517
- L90
- 14
- N95
- 7,479
- L95
- 20
- %GC
- 27.90
- Ns
- 0
- gaps
- 0
- loci tagged
- 796
Analysis
rMLST species identification
| Rank | Taxon | Taxonomy | Support | Matches |
|---|---|---|---|---|
| SPECIES | Borreliella garinii | Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii | 100% |
Analysis performed: 2022-09-01
Schemes and loci
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