Full information on isolate FujiP2_wgs (id:2703)

Provenance/primary metadata

id
2703
isolate
FujiP2_wgs
country
Japan
continent
Asia
region
Shizuoka
species
Borrelia bavariensis
source
tick
detailed source
Ixodes persulcatus
sender
Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
curator
Auto Tagger
update history
13 updates show details
date entered
2020-02-17
datestamp
2023-01-27

Sequence bin

contigs
61
total length
1,296,849 bp
max length
463,983 bp
mean length
21,260 bp
N50
223,185
L50
2
N90
9,033
L90
16
N95
3,481
L95
29
%GC
27.78
Ns
0
gaps
0
loci tagged
793

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Borreliella garinii Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii 100%

Analysis performed: 2022-09-01

Schemes and loci

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