Full information on isolate Arh923-2012_wgs (id:2701)

Provenance/primary metadata

id
2701
isolate
Arh923-2012_wgs
country
Russia [Europe]
continent
Europe
region
Arkhangel sk, Kotlas
species
Borrelia bavariensis
year
2012
source
tick
detailed source
Ixodes persulcatus
sender
Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
curator
Auto Tagger
update history
16 updates show details
date entered
2020-02-17
datestamp
2023-01-27

Sequence bin

contigs
157
total length
1,359,624 bp
max length
463,986 bp
mean length
8,661 bp
N50
222,824
L50
2
N90
7,455
L90
18
N95
3,990
L95
31
%GC
28.17
Ns
0
gaps
0
loci tagged
828

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Borreliella garinii Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii 100%

Analysis performed: 2022-09-01

Schemes and loci

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