Full information on isolate Rock1-15 (id:2667)
Provenance/primary metadata
- id
- 2667
- isolate
- Rock1-15
- aliases
- ACMH01; GCA_000161175.1; NZ_ACMH01000000; PRJNA29675; PRJNA55181; SAMN00727711; SRS265371
- variety serovar
- cereus
- country
- USA
- continent
- North America
- source
- soil
- comments
- Isolated from soil in Rockville, Maryland; Also 454 sequenced
Tracking
- rMLST database accession
- 528
- sender
- Keith Jolley, University of Oxford, UK
- curator
- Auto Tagger
- update history
- 19 updates show details
- date entered
- 2019-11-13
- datestamp
- 2022-10-17
Sequence bin
- contigs
- 199
- total length
- 5,746,378 bp
- max length
- 194,223 bp
- mean length
- 28,877 bp
- N50
- 75,251
- L50
- 27
- N90
- 23,833
- L90
- 77
- N95
- 14,018
- L95
- 93
- %GC
- 34.89
- Ns
- 84
- gaps
- 59
- loci tagged
- 2,738
Annotation quality metrics
| Scheme | Scheme loci | Designated loci | Annotation | |
|---|---|---|---|---|
| Score | Status | |||
| MLST | 7 | 7 | 100 | |
| Ribosomal MLST | 53 | 53 | 100 | |
| B. cereus cgMLST | 1568 | 1543 | 98 | |
Analysis
rMLST species identification
| Rank | Taxon | Taxonomy | Support | Matches |
|---|---|---|---|---|
| SPECIES | Bacillus cereus | Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus cereus | 100% |
Analysis performed: 2021-03-15
Similar isolates (determined by classification schemes)
No similar isolates at any threshold. Show groups
Schemes and loci
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Tools
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Analysis: