Full information on isolate R309803 (id:2666)

Provenance/primary metadata

id
2666
isolate
R309803
aliases
ACLY01; GCA_000160995.1; NZ_ACLY00000000; PRJNA29647; PRJNA55153; SAMN00726683; SRS265282
variety serovar
cereus
country
UK
continent
Europe
host
human
comments
Isolated from blood from a case of septicemia in the UK; also 454 sequenced

Tracking

rMLST database accession
527
sender
Keith Jolley, University of Oxford, UK
curator
Auto Tagger
update history
17 updates show details
date entered
2019-11-13
datestamp
2022-10-17

Sequence bin

contigs
227
total length
5,563,553 bp
max length
276,893 bp
mean length
24,510 bp
N50
78,307
L50
23
N90
20,240
L90
77
N95
12,213
L95
93
%GC
35.36
Ns
7
gaps
7
loci tagged
1,804

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
B. cereus cgMLST1568154698

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Bacillus cereus Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus cereus 100%

Analysis performed: 2021-03-15

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

Schemes and loci

Navigate and select schemes within tree to display allele designations

Tools

Export:
Analysis: