Full information on isolate CDC 684 (id:2665)

Provenance/primary metadata

id
2665
isolate
CDC 684
aliases
CP001215; GCA_000021445.1; NC_012581; PRJNA31329; PRJNA59303; SAMN02603931
variety serovar
anthracis
country
USA
continent
North America
year
1964

Tracking

rMLST database accession
97
sender
Keith Jolley, University of Oxford, UK
curator
Auto Tagger
update history
13 updates show details
date entered
2019-11-13
datestamp
2022-10-12

Sequence bin

contigs
1
length
5,230,115 bp
%GC
35.38
Ns
0
gaps
0
loci tagged
5,043

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
B. cereus cgMLST1568155599
B. anthracis cgMLST3803375098

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Bacillus anthracis Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus anthracis 100%

Analysis performed: 2021-03-15

Similar isolates (determined by classification schemes)

Some groups only contain this isolate. Show single groups

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Ba_cgc_200B. anthracis cgMLSTSingle-linkage200experimental1 (545 isolates)
Ba_cgc_100B. anthracis cgMLSTSingle-linkage100experimental4 (55 isolates)
Ba_cgc_50B. anthracis cgMLSTSingle-linkage50experimental4 (45 isolates)
Ba_cgc_25B. anthracis cgMLSTSingle-linkage25experimental148 (2 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental11 (654 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental11 (648 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental11 (554 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental23 (341 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental29 (46 isolates)
Ba_cgc_200B. anthracis cgMLSTSingle-linkage200experimental1 (545 isolates)
Ba_cgc_100B. anthracis cgMLSTSingle-linkage100experimental4 (55 isolates)
Ba_cgc_50B. anthracis cgMLSTSingle-linkage50experimental4 (45 isolates)
Ba_cgc_25B. anthracis cgMLSTSingle-linkage25experimental148 (2 isolates)
Ba_cgc_10B. anthracis cgMLSTSingle-linkage10experimental335 (1 isolate)
Ba_cgc_5B. anthracis cgMLSTSingle-linkage5experimental377 (1 isolate)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental11 (654 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental11 (648 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental11 (554 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental23 (341 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental29 (46 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental12 (1 isolate)

Schemes and loci

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