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Full information on isolate Ames (id:2664)

Provenance/primary metadata

id
2664
isolate
Ames
aliases
AE016879; GCA_000007845.1; NC_003997; PRJNA309; PRJNA57909; SAMN02603432
variety serovar
anthracis
country
USA
continent
North America
year
1981
comments
avirulent derivative

Tracking

rMLST database accession
96
sender
Keith Jolley, University of Oxford, UK
curator
Auto Tagger
update history
7 updates show details
date entered
2019-11-13
datestamp
2022-10-07

Sequence bin

contigs
1
length
5,227,293 bp
%GC
35.38
Ns
0
gaps
0
loci tagged
5,128

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
B. cereus cgMLST15681568100
B. anthracis cgMLST3803380299

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Bacillus anthracis Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus anthracis 100%

Analysis performed: 2021-03-15

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Ba_cgc_200B. anthracis cgMLSTSingle-linkage200experimental1 (545 isolates)
Ba_cgc_100B. anthracis cgMLSTSingle-linkage100experimental2 (96 isolates)
Ba_cgc_50B. anthracis cgMLSTSingle-linkage50experimental2 (93 isolates)
Ba_cgc_25B. anthracis cgMLSTSingle-linkage25experimental19 (6 isolates)
Ba_cgc_10B. anthracis cgMLSTSingle-linkage10experimental24 (5 isolates)
Ba_cgc_5B. anthracis cgMLSTSingle-linkage5experimental25 (4 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental11 (654 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental11 (648 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental11 (554 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental11 (156 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental178 (94 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental11 (6 isolates)
Ba_cgc_200B. anthracis cgMLSTSingle-linkage200experimental1 (545 isolates)
Ba_cgc_100B. anthracis cgMLSTSingle-linkage100experimental2 (96 isolates)
Ba_cgc_50B. anthracis cgMLSTSingle-linkage50experimental2 (93 isolates)
Ba_cgc_25B. anthracis cgMLSTSingle-linkage25experimental19 (6 isolates)
Ba_cgc_10B. anthracis cgMLSTSingle-linkage10experimental24 (5 isolates)
Ba_cgc_5B. anthracis cgMLSTSingle-linkage5experimental25 (4 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental11 (654 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental11 (648 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental11 (554 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental11 (156 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental178 (94 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental11 (6 isolates)

Schemes and loci

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