Full information on isolate Ames Ancestor (id:2662)

Provenance/primary metadata

id
2662
isolate
Ames Ancestor
aliases
AE017334; GCA_000008445.1; NC_007530; PRJNA10784; PRJNA58083; SAMN02603433
variety serovar
anthracis
country
USA
continent
North America
year
1979
host
human
comments
gold standard for comparative genomics

Tracking

rMLST database accession
57
sender
Keith Jolley, University of Oxford, UK
curator
Auto Tagger
update history
6 updates show details
date entered
2019-11-13
datestamp
2022-10-07

Sequence bin

contigs
1
length
5,227,419 bp
%GC
35.38
Ns
0
gaps
0
loci tagged
5,131

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
B. cereus cgMLST15681568100
B. anthracis cgMLST38033803100

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Bacillus anthracis Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus anthracis 100%

Analysis performed: 2021-03-15

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Ba_cgc_200B. anthracis cgMLSTSingle-linkage200experimental1 (545 isolates)
Ba_cgc_100B. anthracis cgMLSTSingle-linkage100experimental2 (96 isolates)
Ba_cgc_50B. anthracis cgMLSTSingle-linkage50experimental2 (93 isolates)
Ba_cgc_25B. anthracis cgMLSTSingle-linkage25experimental19 (6 isolates)
Ba_cgc_10B. anthracis cgMLSTSingle-linkage10experimental24 (5 isolates)
Ba_cgc_5B. anthracis cgMLSTSingle-linkage5experimental25 (4 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental11 (654 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental11 (648 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental11 (554 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental11 (156 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental178 (94 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental11 (6 isolates)
Ba_cgc_200B. anthracis cgMLSTSingle-linkage200experimental1 (545 isolates)
Ba_cgc_100B. anthracis cgMLSTSingle-linkage100experimental2 (96 isolates)
Ba_cgc_50B. anthracis cgMLSTSingle-linkage50experimental2 (93 isolates)
Ba_cgc_25B. anthracis cgMLSTSingle-linkage25experimental19 (6 isolates)
Ba_cgc_10B. anthracis cgMLSTSingle-linkage10experimental24 (5 isolates)
Ba_cgc_5B. anthracis cgMLSTSingle-linkage5experimental25 (4 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental11 (654 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental11 (648 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental11 (554 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental11 (156 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental178 (94 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental11 (6 isolates)

Schemes and loci

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