Full information on isolate Q1 (id:2661)

Provenance/primary metadata

id
2661
isolate
Q1
aliases
CP000227; GCA_000013065.1; NC_011969; PRJNA16220; PRJNA58529; SAMN02603603
variety serovar
cereus
country
China
continent
Asia
source
environmental
comments
deep-subsurface oil reservoir

Tracking

rMLST database accession
39
sender
Keith Jolley, University of Oxford, UK
curator
Auto Tagger
update history
19 updates show details
date entered
2019-11-13
datestamp
2023-02-03

Sequence bin

contigs
1
length
5,214,195 bp
%GC
35.56
Ns
0
gaps
0
loci tagged
2,842

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
B. cereus cgMLST1568155098

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Bacillus cereus Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus cereus 100%

Analysis performed: 2021-03-15

Similar isolates (determined by classification schemes)

Some groups only contain this isolate. Show single groups

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental10 (31 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental10 (31 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental10 (31 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental10 (31 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental10 (31 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental10 (31 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental10 (31 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental10 (31 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental10 (31 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental10 (31 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental10 (1 isolate)

Schemes and loci

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