Full information on isolate AH187 (id:2660)

Provenance/primary metadata

id
2660
isolate
AH187
aliases
CP001177; GCA_000021225.1; NC_011658; PRJNA17715; PRJNA58753; SAMN02604058
variety serovar
cereus
country
UK
continent
Europe
year
1972
host
human
comments
from vomit

Tracking

rMLST database accession
38
sender
Keith Jolley, University of Oxford, UK
curator
Auto Tagger
update history
17 updates show details
date entered
2019-11-13
datestamp
2022-10-13

Sequence bin

contigs
1
length
5,269,030 bp
%GC
35.59
Ns
0
gaps
0
loci tagged
2,809

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
B. cereus cgMLST1568155999

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
GENUS Bacillus Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus 100%

Analysis performed: 2021-03-15

Similar isolates (determined by classification schemes)

Some groups only contain this isolate. Show single groups

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental9 (37 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental9 (37 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental9 (34 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental9 (28 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental201 (25 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental9 (37 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental9 (37 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental9 (34 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental9 (28 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental201 (25 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental9 (1 isolate)

Schemes and loci

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