Full information on isolate G9842 (id:2658)

Provenance/primary metadata

id
2658
isolate
G9842
aliases
CP001186; GCA_000021305.1; NC_011772; PRJNA17733; PRJNA58759; SAMN02604060
variety serovar
cereus
country
USA
continent
North America
year
1996
source
faeces
host
human

Tracking

rMLST database accession
36
sender
Keith Jolley, University of Oxford, UK
curator
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update history
21 updates show details
date entered
2019-11-13
datestamp
2022-10-17

Sequence bin

contigs
1
length
5,387,334 bp
%GC
35.26
Ns
0
gaps
0
loci tagged
2,778

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST535298
B. cereus cgMLST1568154998

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
GENUS Bacillus Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus 100%

Analysis performed: 2021-03-15

Similar isolates (determined by classification schemes)

Some groups only contain this isolate. Show single groups

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental7 (3 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental7 (3 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental7 (3 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental7 (3 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental7 (3 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental7 (3 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental7 (3 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental7 (3 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental7 (1 isolate)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental7 (1 isolate)

Schemes and loci

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