Full information on isolate 03BB102 (id:2656)

Provenance/primary metadata

id
2656
isolate
03BB102
aliases
CP001407; GCA_000022505.1; NC_012472; PRJNA31307; PRJNA59299; SAMN02603930
variety serovar
cereus
country
USA
continent
North America
source
blood
host
human
comments
severe pneumonia case

Tracking

rMLST database accession
34
sender
Keith Jolley, University of Oxford, UK
curator
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update history
19 updates show details
date entered
2019-11-13
datestamp
2023-02-03

Sequence bin

contigs
1
length
5,269,628 bp
%GC
35.44
Ns
0
gaps
0
loci tagged
3,985

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
B. cereus cgMLST1568154798

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Bacillus cereus Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus cereus 100%

Analysis performed: 2021-03-15

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental5 (2 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental5 (2 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental5 (2 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental5 (2 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental5 (2 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental5 (2 isolates)
Bc_cgc_500B. cereus cgMLSTSingle-linkage500experimental5 (2 isolates)
Bc_cgc_250B. cereus cgMLSTSingle-linkage250experimental5 (2 isolates)
Bc_cgc_100B. cereus cgMLSTSingle-linkage100experimental5 (2 isolates)
Bc_cgc_50B. cereus cgMLSTSingle-linkage50experimental5 (2 isolates)
Bc_cgc_25B. cereus cgMLSTSingle-linkage25experimental5 (2 isolates)
Bc_cgc_10B. cereus cgMLSTSingle-linkage10experimental5 (2 isolates)

Schemes and loci

Navigate and select schemes within tree to display allele designations

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