Full information on isolate BCC0149 (id:17)
Provenance/primary metadata
- id
- 17
- isolate
- BCC0149
- aliases
- #38; FC0328
- species
- Burkholderia multivorans
- genomovar
- II
- country
- USA
- continent
- North America
- source
- CF patient
- detail of isolation
- Sputum
- BCC number
- BCC0149
- year
- 1995
- recA RFLP
- F
- ENA accession
- ERS785050 www.ebi.ac.uk
- sender
- Adam Baldwin, University of Warwick, UK
- curator
- Auto Tagger
- update history
- 7 updates show details
- date entered
- 2005-07-01
- datestamp
- 2016-02-04
Publications (2)
- Baldwin A, Mahenthiralingam E, Drevinek P, Pope C, Waine DJ, Henry DA, Speert DP, Carter P, Vandamme P, LiPuma JJ, Dowson CG (2008). Elucidating global epidemiology of Burkholderia multivorans in cases of cystic fibrosis by multilocus sequence typing. J Clin Microbiol 46:290-5
- Baldwin A, Mahenthiralingam E, Thickett KM, Honeybourne D, Maiden MC, Govan JR, Speert DP, Lipuma JJ, Vandamme P, Dowson CG (2005). Multilocus sequence typing scheme that provides both species and strain differentiation for the Burkholderia cepacia complex. J Clin Microbiol 43:4665-73
Sequence bin
- contigs
- 41
- total length
- 6,346,020 bp
- max length
- 1,036,422 bp
- mean length
- 154,781 bp
- N50
- 436,404
- L50
- 4
- N90
- 108,081
- L90
- 15
- N95
- 76,971
- L95
- 18
- %GC
- 67.17
- Ns
- 105
- gaps
- 4
- loci tagged
- 60
Analysis
rMLST species identification
| Rank | Taxon | Taxonomy | Support | Matches |
|---|---|---|---|---|
| SPECIES | Burkholderia multivorans | Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia multivorans | 100% |
Analysis performed: 2021-03-15
Schemes and loci
Ribosomal MLST
- rST
- 151999
- genus
- Burkholderia
- species
- Burkholderia multivorans
- subspecies
- Not defined
- lineage
- Not defined
- sublineage
- Not defined
- other designation
- Not defined
- notes
- Not defined
Tools
Export:
Analysis: