Full information on isolate BCC0478 (id:1668)
Provenance/primary metadata
- id
- 1668
- isolate
- BCC0478
- alias
- AU1366
- species
- Burkholderia ambifaria
- country
- Unknown
- source
- CF patient
- BCC number
- BCC0478
- ENA accession
- ERS784897 www.ebi.ac.uk
- sender
- Matthew Bull, Cardiff University, UK
- curator
- Charlotte Peeters, Laboratory of Microbiology, LM-UGent, Ghent University, Belgium (E-mail: Charlotte.Peeters@UGent.be)
- update history
- 4 updates show details
- date entered
- 2015-10-09
- datestamp
- 2017-10-16
Sequence bin
- contigs
- 18
- total length
- 7,225,473 bp
- max length
- 2,715,335 bp
- mean length
- 401,416 bp
- N50
- 1,126,868
- L50
- 2
- N90
- 334,018
- L90
- 6
- N95
- 274,682
- L95
- 7
- %GC
- 66.82
- Ns
- 34
- gaps
- 3
- loci tagged
- 60
Analysis
rMLST species identification
Rank | Taxon | Taxonomy | Support | Matches |
---|---|---|---|---|
SPECIES | Burkholderia ambifaria | Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia ambifaria | 100% |
Analysis performed: 2021-03-15
Schemes and loci
Ribosomal MLST
- rST
- 151930
- genus
- Burkholderia
- species
- Burkholderia ambifaria
- subspecies
- Not defined
- lineage
- Not defined
- sublineage
- Not defined
- other designation
- Not defined
- notes
- Not defined
Tools
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Analysis: