Full information on isolate BCC0267 (id:1663)
Provenance/primary metadata
- id
- 1663
- isolate
- BCC0267
- aliases
- BG; CEP0996
- species
- Burkholderia ambifaria
- genomovar
- VII
- LMG
- 19467
- country
- Australia
- continent
- Oceania
- source
- CF patient
- BCC number
- BCC0267
- year
- 1999
- recA RFLP
- N
- ENA accession
- ERS784835 www.ebi.ac.uk
- comments
- LMG 19467 was previously ST-78, but WGS revealed ST-924. Old isolate id 82 was deleted and retired.
- sender
- Matthew Bull, Cardiff University, UK
- curator
- Charlotte Peeters, Laboratory of Microbiology, LM-UGent, Ghent University, Belgium (E-mail: Charlotte.Peeters@UGent.be)
- update history
- 6 updates show details
- date entered
- 2015-10-09
- datestamp
- 2018-06-13
Publications (7)
Sequence bin
- contigs
- 22
- total length
- 7,365,344 bp
- max length
- 1,530,330 bp
- mean length
- 334,789 bp
- N50
- 738,741
- L50
- 4
- N90
- 369,382
- L90
- 9
- N95
- 178,156
- L95
- 11
- %GC
- 66.75
- Ns
- 5236
- gaps
- 32
- loci tagged
- 60
Analysis
rMLST species identification
Rank | Taxon | Taxonomy | Support | Matches |
---|---|---|---|---|
SPECIES | Burkholderia ambifaria | Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia ambifaria | 100% |
Analysis performed: 2021-03-15
Schemes and loci
Ribosomal MLST
- rST
- 151924
- genus
- Burkholderia
- species
- Burkholderia ambifaria
- subspecies
- Not defined
- lineage
- Not defined
- sublineage
- Not defined
- other designation
- Not defined
- notes
- Not defined
Tools
Export:
Analysis: