Full information on isolate HC-2 (id:1015)

Provenance/primary metadata

id
1015
isolate
HC-2
species
Arcobacter butzleri
country
Spain
continent
Europe
region
Alto Deba
year
2017
age yr
57
sex
male
disease
systemic disease
source
human stool
epidemiology
sporadic case
comments
pruritus in a patient with prostate cancer
sender
Irati Martinez-Malaxetxebarria, UPV/EHU
curator
Keith Jolley, University of Oxford, UK (E-mail: keith.jolley@biology.ox.ac.uk)
update history
2 updates show details
date entered
2021-02-25
datestamp
2021-02-25

Sequence bin

contigs
57
total length
2,239,076 bp
max length
342,238 bp
mean length
39,283 bp
N50
142,495
L50
5
N90
43,888
L90
16
N95
23,735
L95
20
%GC
26.87
Ns
467
gaps
3
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Aliarcobacter butzleri Proteobacteria > Epsilonproteobacteria > Campylobacterales > Arcobacteraceae > Aliarcobacter > Aliarcobacter butzleri 93%

Analysis performed: 2022-12-26

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