Full information on isolate 12_ax (id:760)
Provenance/primary metadata
- id
- 760
- isolate
- 12_ax
- country
- Vietnam
- continent
- Asia
- year
- 2004
- species
- Acinetobacter baumannii
- species id method
- unknown
- detailed source
- asymptomatic carriage
Antimicrobial resistance
- OXA class
- Oxacillinases (Class D)
- OXA betalactamase
- blaOXA-51-like [OXA-742]
Tracking
- sender
- Kat Holt, University of Melbourne, Australia
- curator
- Auto Tagger
- update history
- 30 updates show details
- date entered
- 2015-05-22
- datestamp
- 2022-12-27
Sequence bin
- contigs
- 42
- total length
- 4,119,535 bp
- max length
- 541,954 bp
- mean length
- 98,085 bp
- N50
- 240,958
- L50
- 5
- N90
- 68,942
- L90
- 17
- N95
- 36,929
- L95
- 21
- %GC
- 38.82
- Ns
- 1299
- gaps
- 37
- loci tagged
- 2,580
Annotation quality metrics
| Scheme | Scheme loci | Designated loci | Annotation | |
|---|---|---|---|---|
| Score | Status | |||
| MLST (Oxford) | 7 | 6 | 85 | |
| MLST (Pasteur) | 7 | 7 | 100 | |
| Ribosomal MLST | 53 | 53 | 100 | |
| A. baumannii cgMLST | 2133 | 2126 | 99 | |
Analysis
rMLST species identification
| Rank | Taxon | Taxonomy | Support | Matches |
|---|---|---|---|---|
| SPECIES | Acinetobacter baumannii | Proteobacteria > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii | 100% |
Analysis performed: 2023-01-11
Similar isolates (determined by classification schemes)
No similar isolates at any threshold. Show groups
Schemes and loci
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Tools
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