Full information on isolate 541915 (id:2243)

Projects

This isolate is a member of the following project:

whole genome MLST
Analysis of the population structure of Acinetobacter species in the Acinetobacter calcoaceticus-baumannii (Acb) complex obtained from publicly-available Acinetobacter genomes using the Acinetobacter baumannii PubMLST website

Provenance/primary metadata

id
2243
isolate
541915
country
USA
continent
North America
species
Acinetobacter baumannii
species id method
unknown
source
sputum
Genbank accession
JFXQ00000000.1 www.ncbi.nlm.nih.gov

Tracking

sender
Raffaele Zarrilli, Universita di Napoli Federico II
curator
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update history
31 updates show details
date entered
2015-02-26
datestamp
2022-12-27

Sequence bin

contigs
92
total length
4,148,609 bp
max length
339,964 bp
mean length
45,094 bp
N50
117,542
L50
11
N90
30,655
L90
41
N95
25,996
L95
48
%GC
39.17
Ns
0
gaps
0
loci tagged
2,560

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST (Oxford)77100
MLST (Pasteur)77100
Ribosomal MLST5353100
A. baumannii cgMLST2133212499

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Acinetobacter baumannii Proteobacteria > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii 100%

Analysis performed: 2023-01-11

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

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