Full information on isolate ANC 4052 (id:2116)

Projects

This isolate is a member of the following project:

whole genome MLST
Analysis of the population structure of Acinetobacter species in the Acinetobacter calcoaceticus-baumannii (Acb) complex obtained from publicly-available Acinetobacter genomes using the Acinetobacter baumannii PubMLST website

Provenance/primary metadata

id
2116
isolate
ANC 4052
country
USA
continent
North America
species
Acinetobacter dijkshoorniae
species id method
rpoB gene sequence
source
blood
Genbank accession
APQO00000000.1 www.ncbi.nlm.nih.gov
comments
1995-2002
sender
Alexandr Nemec, National Institute of Public Heatlh, Prague, Czech Republic
curator
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update history
10 updates show details
date entered
2014-07-11
datestamp
2018-02-06

Publication (1)

  • Mar√≠-Almirall M, Cosgaya C, Higgins PG, Van Assche A, Telli M, Huys G, Lievens B, Seifert H, Dijkshoorn L, Roca I, Vila J (2017). MALDI-TOF/MS identification of species from the Acinetobacter baumannii (Ab) group revisited: inclusion of the novel A.¬†seifertii and A.¬†dijkshoorniae species. Clin Microbiol Infect 23:210.e1-210.e9

Sequence bin

contigs
8
total length
3,953,097 bp
max length
1,681,232 bp
mean length
494,138 bp
N50 contig number
2
N50 length (L50)
1,452,189
N90 contig number
4
N90 length (L90)
277,481
N95 contig number
5
N95 length (L95)
112,215
loci tagged
60

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Schemes and loci

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