Full information on isolate 1179249 (id:2077)

Provenance/primary metadata

id
2077
isolate
1179249
country
USA
continent
North America
species
Acinetobacter nosocomialis
species id method
unknown
source
sputum
Genbank accession
JFXC00000000.1 www.ncbi.nlm.nih.gov
comments
Acinetobacter nosocomialis species identification was based on complete rpoB gene 99% identical to A. nosocomialis

Tracking

sender
NCBI NCBI, National Center for Biotechnology Information
curator
Auto Tagger
update history
2 updates show details
date entered
2014-07-02
datestamp
2022-12-27

Sequence bin

contigs
77
total length
3,938,493 bp
max length
328,605 bp
mean length
51,150 bp
N50
155,959
L50
10
N90
35,153
L90
31
N95
27,008
L95
38
%GC
38.82
Ns
0
gaps
0
loci tagged
2,052

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST (Oxford)77100
MLST (Pasteur)77100
Ribosomal MLST5353100

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Acinetobacter nosocomialis Proteobacteria > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter nosocomialis 100%

Analysis performed: 2023-01-11

Schemes and loci

Navigate and select schemes within tree to display allele designations

Tools

Export:
Analysis: