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Full information on isolate Dg61 (id:24189)

Provenance/meta data

id
24189
isolate
Dg61
aliases
ERR278290; SC_RUN_9471_1#65
country
UK
continent
Europe
region
Berkshire
source
other animal
species
Campylobacter jejuni
ENA accession
ERR278290 www.ebi.ac.uk
sender
Alison Cody, Department of Zoology, Oxford University, UK
curator
Sophie Hedges, Oxford University (E-mail: sophie.hedges@zoo.ox.ac.uk)
update history
45 updates show details
date entered
2013-04-25
datestamp
2019-05-14

Publications (2)

  • Cody AJ, Bray JE, Jolley KA, McCarthy ND, Maiden MCJ (2017). Core Genome Multilocus Sequence Typing Scheme for Stable, Comparative Analyses of Campylobacter jejuni and C. coli Human Disease Isolates. J Clin Microbiol 55:2086-2097
  • Pearson BM, Louwen R, van Baarlen P, van Vliet AH (2015). Differential Distribution of Type II CRISPR-Cas Systems in Agricultural and Nonagricultural Campylobacter coli and Campylobacter jejuni Isolates Correlates with Lack of Shared Environments. Genome Biol Evol 7:2663-79

Sequence bin

contigs
37
total length
1,632,980 bp
max length
497,787 bp
mean length
44,135 bp
N50 contig number
3
N50 length (L50)
186,339
N90 contig number
8
N90 length (L90)
79,288
N95 contig number
9
N95 length (L95)
38,934
loci tagged
1,594
detailed breakdown
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