Description of database fields

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field namecommentsdata typeallowed valuesrequiredmaximum length (characters)
idprimary key integer - yes 5
isolateisolate name text - yes 20
aliasesalternative names for isolatetext (multiple)-no-
referencesPubMed ids that link to publications that describe or include recordinteger (multiple)-no-
countrycountry where strain was isolated text
Afghanistan
Albania
Algeria
Andorra
Angola
Antigua & Barbuda
Argentina
Armenia
Australia
Austria
Azerbaijan
Bahamas
Bahrain
Bangladesh
Barbados
Belarus
Belgium
Belize
Benin
Bhutan
Bolivia
Bosnia & Herzegovina
Botswana
Brazil
Brunei
Bulgaria
Burkina Faso
Burma
Burundi
Cambodia
Cameroon
Canada
Cape Verde
Central African Republic
Chad
Chile
China
Colombia
Comoros
Congo [DRC]
Costa Rica
Croatia
Cuba
Cyprus
Czech Republic
Denmark
Djibouti
Dominica
Dominican Republic
East Timor
Ecuador
Egypt
El Salvador
Equatorial Guinea
Eritrea
Estonia
Ethiopia
Faroe Islands
Fiji
Finland
France
Gabon
Georgia
Germany
Ghana
Greece
Grenada
Guadeloupe
Guatemala
Guinea
Guinea Bissau
Guyana
Haiti
Honduras
Hungary
Iceland
India
Indonesia
Iran
Iraq
Ireland
Isle of Man
Israel
Italy
Ivory Coast
Jamaica
Japan
Jordan
Kazakhstan
Kenya
Kiribati
Kuwait
Kyrgyzstan
Laos
Latvia
Lebanon
Lesotho
Liberia
Libya
Liechtenstein
Lithuania
Luxembourg
Macedonia
Madagascar
Malawi
Malaysia
Maldives
Mali
Malta
Marshall Islands
Martinique
Mauritania
Mauritius
Mayotte
Mexico
Micronesia
Moldavia
Moldova
Monaco
Mongolia
Montenegro
Morocco
Mozambique
Namibia
Nauru
Nepal
New Caledonia
New Zealand
Nicaragua
Niger
Nigeria
None
North Korea
Norway
Oman
Pakistan
Palau
Palestinian territories
Panama
Papua New Guinea
Paraguay
Peru
Philippines
Poland
Portugal
Qatar
Reunion
Romania
Russia
Rwanda
Samoa
San Marino
São Tomé and Príncipe
Saudi Arabia
Senegal
Serbia
Seychelles
Sierra Leone
Singapore
Slovakia
Slovenia
Solomon Islands
Somalia
South Africa
South Korea
Spain
Sri Lanka
St. Kitts & Nevis
St. Lucia
Sudan
Suriname
Swaziland
Sweden
Switzerland
Syria
Tahiti
Taiwan
Tajikistan
Tanzania
Thailand
The Gambia
The Netherlands
Togo
Tonga
Trinidad & Tobago
Tunisia
Turkey
Turkmenistan
Tuvalu
UK
USA
Uganda
Ukraine
United Arab Emirates
Uruguay
Uzbekistan
Vanuatu
Vatican City
Venezuela
Vietnam
Yemen
Zambia
Zimbabwe
Unknown
yes -
region text - no 60
year integer min: 1900; max: 2020 yes 4
monthmonth of isolation (1-12) integer min: 1; max: 12 no 4
animal text
horse
human
donkey
goat
camel
llama
sheep
cow
dog
pig
monkey
other
no -
breed text - no 12
age_yr integer - no 4
age_mth integer - no 4
sex text
male
female
no -
disease text
respiratory
pneumonia
meningitis
wound
septicaemia
abortion/uterine infection
keratitis
mastitis
pericarditis
purpura haemorrhagica
nephritis
strangles
non-strangles lymph node abscesses
other
none apparent
no -
epidemiology text
disease
carrier
colonised
other
no -
source text
nasal swab
nasal wash
tracheal wash
guttural pouch wash
skin swab
wound swab
blood
eye swab
urine
foetal swab
placental swab
clittoral swab
abscess
other
no -
species text
S. equi
S. zooepidemicus
no -
ribose_fermentation text
yes
no
no -
sorbitol_fermentation text
yes
no
no -
trehalose_fermentation text
yes
no
no -
penicillin text
R
S
no -
erythromycin text
R
S
no -
gentamycin text
R
S
no -
ceftiofur text
R
S
no -
oxytetracycline text
R
S
no -
tribrissen text
R
S
no -
_16S_23S_PCR_type text
A
A1
B
B1
B1/D1
C
C1
D
D1
other
no -
HV_PCR_type text
1
2
3
4
5
U
1/2
1/4
2/3
2/5
other
no -
MLEE_designation text - no 12
sla_present text
yes
no
no -
SpeM_present text
yes
no
no -
TCS1 text
yes
no
no -
TCS2 text
yes
no
no -
sortase_locus text
yes
no
no -
comments text - no 128
sendersender unique name, link to users integer Click for list of sender ids yes 4
curatorcurator who entered data,link to users integer Click for list of curator ids yes 4
date_entereddate first entered date - yes 10
datestampdate last modified date - yes 10