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Sequence bin for 1276A_19

Contig summary statistics

Contigs
125
Total length
2,573,577
Minimum length
128
Maximum length
261,785
Mean length
20,589
N50
134,048
L50
7
N90
39,117
L90
20
N95
31,546
L95
23

FASTAEMBLGBK

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
282 Illumina contig00001 len=261785 cov=62.7 corr=0 origname=NODE_1_length_261785_cov_62.734722_pilon sw=shovill-spades/1.1.0 date=20200922 261785
232 Illumina contig00002 len=229336 cov=44.6 corr=0 origname=NODE_2_length_229336_cov_44.639744_pilon sw=shovill-spades/1.1.0 date=20200922 229336
225 Illumina contig00003 len=225388 cov=60.7 corr=0 origname=NODE_3_length_225388_cov_60.699238_pilon sw=shovill-spades/1.1.0 date=20200922 225388
268 Illumina contig00004 len=208017 cov=72.5 corr=0 origname=NODE_4_length_208017_cov_72.537400_pilon sw=shovill-spades/1.1.0 date=20200922 208017
179 Illumina contig00005 len=168138 cov=57.7 corr=0 origname=NODE_5_length_168138_cov_57.717911_pilon sw=shovill-spades/1.1.0 date=20200922 168138
263 Illumina contig00006 len=143121 cov=41.3 corr=0 origname=NODE_6_length_143121_cov_41.324923_pilon sw=shovill-spades/1.1.0 date=20200922 143121
265 Illumina contig00007 len=134048 cov=38.6 corr=0 origname=NODE_7_length_134048_cov_38.581164_pilon sw=shovill-spades/1.1.0 date=20200922 134048
244 Illumina contig00008 len=131042 cov=45.5 corr=0 origname=NODE_8_length_131042_cov_45.464614_pilon sw=shovill-spades/1.1.0 date=20200922 131042
226 Illumina contig00009 len=111752 cov=69.2 corr=0 origname=NODE_9_length_111752_cov_69.190226_pilon sw=shovill-spades/1.1.0 date=20200922 111752
220 Illumina contig00010 len=98124 cov=51.3 corr=0 origname=NODE_10_length_98124_cov_51.343204_pilon sw=shovill-spades/1.1.0 date=20200922 98124
222 Illumina contig00011 len=91529 cov=44.7 corr=0 origname=NODE_11_length_91529_cov_44.655445_pilon sw=shovill-spades/1.1.0 date=20200922 91529
217 Illumina contig00012 len=88548 cov=63.3 corr=0 origname=NODE_12_length_88548_cov_63.251761_pilon sw=shovill-spades/1.1.0 date=20200922 88548
170 Illumina contig00013 len=85591 cov=49.7 corr=0 origname=NODE_13_length_85591_cov_49.748678_pilon sw=shovill-spades/1.1.0 date=20200922 85591
287 Illumina contig00014 len=73846 cov=55.0 corr=0 origname=NODE_14_length_73846_cov_55.040058_pilon sw=shovill-spades/1.1.0 date=20200922 73846
266 Illumina contig00015 len=60785 cov=46.8 corr=0 origname=NODE_15_length_60785_cov_46.781068_pilon sw=shovill-spades/1.1.0 date=20200922 60785
249 Illumina contig00016 len=60559 cov=67.9 corr=0 origname=NODE_16_length_60559_cov_67.918619_pilon sw=shovill-spades/1.1.0 date=20200922 60559
235 Illumina contig00017 len=58395 cov=56.4 corr=0 origname=NODE_17_length_58395_cov_56.364488_pilon sw=shovill-spades/1.1.0 date=20200922 58395
174 Illumina contig00018 len=43092 cov=35.2 corr=0 origname=NODE_18_length_43092_cov_35.171232_pilon sw=shovill-spades/1.1.0 date=20200922 43092
269 Illumina contig00019 len=40808 cov=72.9 corr=0 origname=NODE_19_length_40808_cov_72.875347_pilon sw=shovill-spades/1.1.0 date=20200922 40808
261 Illumina contig00020 len=39117 cov=64.6 corr=0 origname=NODE_20_length_39117_cov_64.564914_pilon sw=shovill-spades/1.1.0 date=20200922 39117
195 Illumina contig00021 len=37563 cov=49.8 corr=0 origname=NODE_21_length_37563_cov_49.830270_pilon sw=shovill-spades/1.1.0 date=20200922 37563
291 Illumina contig00022 len=33186 cov=60.8 corr=0 origname=NODE_22_length_33186_cov_60.819384_pilon sw=shovill-spades/1.1.0 date=20200922 33186
214 Illumina contig00023 len=31546 cov=52.0 corr=0 origname=NODE_23_length_31546_cov_51.954104_pilon sw=shovill-spades/1.1.0 date=20200922 31546
211 Illumina contig00024 len=16468 cov=71.6 corr=0 origname=NODE_24_length_16468_cov_71.592375_pilon sw=shovill-spades/1.1.0 date=20200922 16468
199 Illumina contig00025 len=15557 cov=76.6 corr=0 origname=NODE_25_length_15557_cov_76.597602_pilon sw=shovill-spades/1.1.0 date=20200922 15557
283 Illumina contig00026 len=15527 cov=78.8 corr=0 origname=NODE_26_length_15527_cov_78.819935_pilon sw=shovill-spades/1.1.0 date=20200922 15527
250 Illumina contig00027 len=10102 cov=65.7 corr=0 origname=NODE_27_length_10102_cov_65.728722_pilon sw=shovill-spades/1.1.0 date=20200922 10102
221 Illumina contig00028 len=9529 cov=44.8 corr=0 origname=NODE_28_length_9529_cov_44.792278_pilon sw=shovill-spades/1.1.0 date=20200922 9529
206 Illumina contig00029 len=7649 cov=29.5 corr=0 origname=NODE_29_length_7649_cov_29.462643_pilon sw=shovill-spades/1.1.0 date=20200922 7649
198 Illumina contig00030 len=7368 cov=39.1 corr=0 origname=NODE_30_length_7368_cov_39.074023_pilon sw=shovill-spades/1.1.0 date=20200922 7368
167 Illumina contig00031 len=4401 cov=37.4 corr=0 origname=NODE_31_length_4401_cov_37.368507_pilon sw=shovill-spades/1.1.0 date=20200922 4401
240 Illumina contig00032 len=2937 cov=326.5 corr=0 origname=NODE_32_length_2937_cov_326.465836_pilon sw=shovill-spades/1.1.0 date=20200922 2937
178 Illumina contig00033 len=1880 cov=104.0 corr=0 origname=NODE_33_length_1880_cov_103.969766_pilon sw=shovill-spades/1.1.0 date=20200922 1880
241 Illumina contig00034 len=1859 cov=76.3 corr=0 origname=NODE_34_length_1859_cov_76.318129_pilon sw=shovill-spades/1.1.0 date=20200922 1859
223 Illumina contig00035 len=1807 cov=93.3 corr=0 origname=NODE_35_length_1807_cov_93.346429_pilon sw=shovill-spades/1.1.0 date=20200922 1807
233 Illumina contig00036 len=1624 cov=170.4 corr=0 origname=NODE_36_length_1624_cov_170.431530_pilon sw=shovill-spades/1.1.0 date=20200922 1624
224 Illumina contig00037 len=817 cov=174.6 corr=1 origname=NODE_46_length_817_cov_174.585507_pilon sw=shovill-spades/1.1.0 date=20200922 817
276 Illumina contig00038 len=788 cov=275.2 corr=0 origname=NODE_48_length_788_cov_275.223903_pilon sw=shovill-spades/1.1.0 date=20200922 788
277 Illumina contig00040 len=753 cov=31.9 corr=0 origname=NODE_55_length_753_cov_31.905751_pilon sw=shovill-spades/1.1.0 date=20200922 753
168 Illumina contig00039 len=753 cov=256.7 corr=0 origname=NODE_54_length_753_cov_256.725240_pilon sw=shovill-spades/1.1.0 date=20200922 753
274 Illumina contig00041 len=568 cov=380.5 corr=0 origname=NODE_85_length_568_cov_380.512472_pilon sw=shovill-spades/1.1.0 date=20200922 568
218 Illumina contig00042 len=555 cov=75.5 corr=0 origname=NODE_86_length_555_cov_75.514019_pilon sw=shovill-spades/1.1.0 date=20200922 555
213 Illumina contig00043 len=497 cov=25.8 corr=0 origname=NODE_88_length_497_cov_25.775676_pilon sw=shovill-spades/1.1.0 date=20200922 497
252 Illumina contig00044 len=455 cov=20.7 corr=0 origname=NODE_89_length_455_cov_20.719512_pilon sw=shovill-spades/1.1.0 date=20200922 455
229 Illumina contig00045 len=415 cov=25.5 corr=0 origname=NODE_91_length_415_cov_25.503472_pilon sw=shovill-spades/1.1.0 date=20200922 415
169 Illumina contig00046 len=406 cov=72.5 corr=0 origname=NODE_92_length_406_cov_72.458781_pilon sw=shovill-spades/1.1.0 date=20200922 406
270 Illumina contig00047 len=377 cov=487.8 corr=0 origname=NODE_94_length_377_cov_487.816000_pilon sw=shovill-spades/1.1.0 date=20200922 377
219 Illumina contig00048 len=364 cov=67.4 corr=0 origname=NODE_95_length_364_cov_67.375527_pilon sw=shovill-spades/1.1.0 date=20200922 364
191 Illumina contig00049 len=337 cov=74.2 corr=0 origname=NODE_96_length_337_cov_74.247619_pilon sw=shovill-spades/1.1.0 date=20200922 337
184 Illumina contig00050 len=332 cov=204.5 corr=0 origname=NODE_97_length_332_cov_204.458537_pilon sw=shovill-spades/1.1.0 date=20200922 332
236 Illumina contig00051 len=304 cov=49.9 corr=0 origname=NODE_100_length_304_cov_49.920904_pilon sw=shovill-spades/1.1.0 date=20200922 304
260 Illumina contig00052 len=296 cov=221.2 corr=0 origname=NODE_101_length_296_cov_221.213018_pilon sw=shovill-spades/1.1.0 date=20200922 296
216 Illumina contig00053 len=270 cov=1270.9 corr=0 origname=NODE_106_length_270_cov_1270.944056_pilon sw=shovill-spades/1.1.0 date=20200922 270
271 Illumina contig00054 len=264 cov=317.7 corr=0 origname=NODE_108_length_264_cov_317.686131_pilon sw=shovill-spades/1.1.0 date=20200922 264
186 Illumina contig00055 len=259 cov=15.5 corr=0 origname=NODE_109_length_259_cov_15.477273_pilon sw=shovill-spades/1.1.0 date=20200922 259
275 Illumina contig00057 len=255 cov=84.7 corr=0 origname=NODE_111_length_255_cov_84.703125_pilon sw=shovill-spades/1.1.0 date=20200922 255
239 Illumina contig00056 len=255 cov=134.4 corr=0 origname=NODE_110_length_255_cov_134.375000_pilon sw=shovill-spades/1.1.0 date=20200922 255
205 Illumina contig00058 len=254 cov=10.5 corr=0 origname=NODE_112_length_254_cov_10.535433_pilon sw=shovill-spades/1.1.0 date=20200922 254
183 Illumina contig00059 len=252 cov=25.2 corr=0 origname=NODE_113_length_252_cov_25.184000_pilon sw=shovill-spades/1.1.0 date=20200922 252
262 Illumina contig00060 len=249 cov=7.8 corr=0 origname=NODE_114_length_249_cov_7.819672_pilon sw=shovill-spades/1.1.0 date=20200922 249
251 Illumina contig00061 len=249 cov=7.3 corr=0 origname=NODE_115_length_249_cov_7.278689_pilon sw=shovill-spades/1.1.0 date=20200922 249
288 Illumina contig00062 len=245 cov=7.6 corr=0 origname=NODE_116_length_245_cov_7.644068_pilon sw=shovill-spades/1.1.0 date=20200922 245
256 Illumina contig00063 len=243 cov=11.6 corr=0 origname=NODE_117_length_243_cov_11.551724_pilon sw=shovill-spades/1.1.0 date=20200922 243
180 Illumina contig00064 len=238 cov=9.6 corr=0 origname=NODE_118_length_238_cov_9.567568_pilon sw=shovill-spades/1.1.0 date=20200922 238
190 Illumina contig00065 len=234 cov=29.1 corr=0 origname=NODE_119_length_234_cov_29.065421_pilon sw=shovill-spades/1.1.0 date=20200922 234
182 Illumina contig00067 len=234 cov=8.0 corr=0 origname=NODE_121_length_234_cov_8.009346_pilon sw=shovill-spades/1.1.0 date=20200922 234
201 Illumina contig00066 len=234 cov=14.9 corr=0 origname=NODE_120_length_234_cov_14.897196_pilon sw=shovill-spades/1.1.0 date=20200922 234
245 Illumina contig00068 len=228 cov=13.6 corr=0 origname=NODE_122_length_228_cov_13.603960_pilon sw=shovill-spades/1.1.0 date=20200922 228
177 Illumina contig00070 len=226 cov=8.5 corr=1 origname=NODE_124_length_226_cov_8.484848_pilon sw=shovill-spades/1.1.0 date=20200922 226
204 Illumina contig00069 len=226 cov=100.1 corr=0 origname=NODE_123_length_226_cov_100.050505_pilon sw=shovill-spades/1.1.0 date=20200922 226
176 Illumina contig00071 len=219 cov=8.2 corr=0 origname=NODE_125_length_219_cov_8.163043_pilon sw=shovill-spades/1.1.0 date=20200922 219
212 Illumina contig00072 len=218 cov=51.9 corr=0 origname=NODE_126_length_218_cov_51.868132_pilon sw=shovill-spades/1.1.0 date=20200922 218
284 Illumina contig00073 len=214 cov=224.6 corr=0 origname=NODE_127_length_214_cov_224.620690_pilon sw=shovill-spades/1.1.0 date=20200922 214
237 Illumina contig00074 len=214 cov=42.9 corr=0 origname=NODE_128_length_214_cov_42.931034_pilon sw=shovill-spades/1.1.0 date=20200922 214
187 Illumina contig00075 len=213 cov=8.4 corr=0 origname=NODE_130_length_213_cov_8.418605_pilon sw=shovill-spades/1.1.0 date=20200922 213
290 Illumina contig00076 len=213 cov=44.2 corr=0 origname=NODE_129_length_213_cov_44.197674_pilon sw=shovill-spades/1.1.0 date=20200922 213
189 Illumina contig00077 len=212 cov=76.3 corr=0 origname=NODE_131_length_212_cov_76.258824_pilon sw=shovill-spades/1.1.0 date=20200922 212
264 Illumina contig00078 len=210 cov=10.9 corr=0 origname=NODE_132_length_210_cov_10.891566_pilon sw=shovill-spades/1.1.0 date=20200922 210
181 Illumina contig00079 len=207 cov=7.4 corr=0 origname=NODE_133_length_207_cov_7.437500_pilon sw=shovill-spades/1.1.0 date=20200922 207
278 Illumina contig00080 len=202 cov=15.3 corr=0 origname=NODE_134_length_202_cov_15.346667_pilon sw=shovill-spades/1.1.0 date=20200922 202
280 Illumina contig00082 len=198 cov=7.7 corr=0 origname=NODE_136_length_198_cov_7.690141_pilon sw=shovill-spades/1.1.0 date=20200922 198
173 Illumina contig00081 len=198 cov=9.2 corr=0 origname=NODE_135_length_198_cov_9.169014_pilon sw=shovill-spades/1.1.0 date=20200922 198
234 Illumina contig00083 len=194 cov=62.3 corr=0 origname=NODE_137_length_194_cov_62.283582_pilon sw=shovill-spades/1.1.0 date=20200922 194
267 Illumina contig00084 len=192 cov=9.4 corr=0 origname=NODE_138_length_192_cov_9.369231_pilon sw=shovill-spades/1.1.0 date=20200922 192
185 Illumina contig00085 len=191 cov=20.5 corr=0 origname=NODE_139_length_191_cov_20.484375_pilon sw=shovill-spades/1.1.0 date=20200922 191
258 Illumina contig00086 len=187 cov=83.8 corr=0 origname=NODE_140_length_187_cov_83.816667_pilon sw=shovill-spades/1.1.0 date=20200922 187
253 Illumina contig00087 len=180 cov=7.5 corr=0 origname=NODE_142_length_180_cov_7.471698_pilon sw=shovill-spades/1.1.0 date=20200922 180
230 Illumina contig00088 len=178 cov=120.7 corr=0 origname=NODE_143_length_178_cov_120.705882_pilon sw=shovill-spades/1.1.0 date=20200922 178
243 Illumina contig00089 len=174 cov=23.9 corr=0 origname=NODE_144_length_174_cov_23.914894_pilon sw=shovill-spades/1.1.0 date=20200922 174
247 Illumina contig00090 len=171 cov=286.0 corr=0 origname=NODE_145_length_171_cov_286.045455_pilon sw=shovill-spades/1.1.0 date=20200922 171
255 Illumina contig00091 len=168 cov=78.9 corr=0 origname=NODE_146_length_168_cov_78.853659_pilon sw=shovill-spades/1.1.0 date=20200922 168
248 Illumina contig00094 len=165 cov=13.3 corr=0 origname=NODE_147_length_165_cov_13.315789_pilon sw=shovill-spades/1.1.0 date=20200922 165
210 Illumina contig00092 len=165 cov=8.0 corr=0 origname=NODE_148_length_165_cov_8.026316_pilon sw=shovill-spades/1.1.0 date=20200922 165
208 Illumina contig00093 len=165 cov=7.2 corr=0 origname=NODE_149_length_165_cov_7.157895_pilon sw=shovill-spades/1.1.0 date=20200922 165
215 Illumina contig00096 len=164 cov=9.4 corr=0 origname=NODE_151_length_164_cov_9.378378_pilon sw=shovill-spades/1.1.0 date=20200922 164
279 Illumina contig00095 len=164 cov=63.2 corr=0 origname=NODE_150_length_164_cov_63.189189_pilon sw=shovill-spades/1.1.0 date=20200922 164
200 Illumina contig00098 len=159 cov=338.2 corr=0 origname=NODE_152_length_159_cov_338.218750_pilon sw=shovill-spades/1.1.0 date=20200922 159
254 Illumina contig00097 len=159 cov=25.0 corr=0 origname=NODE_153_length_159_cov_24.968750_pilon sw=shovill-spades/1.1.0 date=20200922 159
197 Illumina contig00100 len=157 cov=7.7 corr=0 origname=NODE_155_length_157_cov_7.733333_pilon sw=shovill-spades/1.1.0 date=20200922 157
281 Illumina contig00099 len=157 cov=9.7 corr=0 origname=NODE_154_length_157_cov_9.733333_pilon sw=shovill-spades/1.1.0 date=20200922 157
207 Illumina contig00101 len=156 cov=13.2 corr=0 origname=NODE_156_length_156_cov_13.172414_pilon sw=shovill-spades/1.1.0 date=20200922 156
192 Illumina contig00102 len=153 cov=7.4 corr=0 origname=NODE_157_length_153_cov_7.384615_pilon sw=shovill-spades/1.1.0 date=20200922 153
196 Illumina contig00105 len=150 cov=141.9 corr=0 origname=NODE_159_length_150_cov_141.913043_pilon sw=shovill-spades/1.1.0 date=20200922 150
194 Illumina contig00103 len=150 cov=21.9 corr=0 origname=NODE_162_length_150_cov_21.869565_pilon sw=shovill-spades/1.1.0 date=20200922 150
238 Illumina contig00107 len=150 cov=16.0 corr=0 origname=NODE_163_length_150_cov_16.000000_pilon sw=shovill-spades/1.1.0 date=20200922 150
188 Illumina contig00104 len=150 cov=31.6 corr=0 origname=NODE_161_length_150_cov_31.608696_pilon sw=shovill-spades/1.1.0 date=20200922 150
171 Illumina contig00108 len=150 cov=44.6 corr=0 origname=NODE_160_length_150_cov_44.565217_pilon sw=shovill-spades/1.1.0 date=20200922 150
286 Illumina contig00106 len=150 cov=253.3 corr=0 origname=NODE_158_length_150_cov_253.260870_pilon sw=shovill-spades/1.1.0 date=20200922 150
227 Illumina contig00109 len=148 cov=19.4 corr=0 origname=NODE_164_length_148_cov_19.428571_pilon sw=shovill-spades/1.1.0 date=20200922 148
289 Illumina contig00110 len=147 cov=237.2 corr=0 origname=NODE_165_length_147_cov_237.200000_pilon sw=shovill-spades/1.1.0 date=20200922 147
175 Illumina contig00111 len=145 cov=8.8 corr=0 origname=NODE_166_length_145_cov_8.833333_pilon sw=shovill-spades/1.1.0 date=20200922 145
228 Illumina contig00112 len=142 cov=15.6 corr=0 origname=NODE_167_length_142_cov_15.600000_pilon sw=shovill-spades/1.1.0 date=20200922 142
203 Illumina contig00114 len=138 cov=253.0 corr=0 origname=NODE_168_length_138_cov_253.000000_pilon sw=shovill-spades/1.1.0 date=20200922 138
257 Illumina contig00113 len=138 cov=194.9 corr=0 origname=NODE_169_length_138_cov_194.909091_pilon sw=shovill-spades/1.1.0 date=20200922 138
273 Illumina contig00115 len=137 cov=95.6 corr=0 origname=NODE_170_length_137_cov_95.600000_pilon sw=shovill-spades/1.1.0 date=20200922 137
209 Illumina contig00116 len=136 cov=234.1 corr=0 origname=NODE_171_length_136_cov_234.111111_pilon sw=shovill-spades/1.1.0 date=20200922 136
242 Illumina contig00117 len=134 cov=33.4 corr=0 origname=NODE_172_length_134_cov_33.428571_pilon sw=shovill-spades/1.1.0 date=20200922 134
272 Illumina contig00118 len=132 cov=24.0 corr=0 origname=NODE_173_length_132_cov_24.000000_pilon sw=shovill-spades/1.1.0 date=20200922 132
202 Illumina contig00119 len=131 cov=7.2 corr=0 origname=NODE_174_length_131_cov_7.250000_pilon sw=shovill-spades/1.1.0 date=20200922 131
193 Illumina contig00120 len=130 cov=15.3 corr=0 origname=NODE_177_length_130_cov_15.333333_pilon sw=shovill-spades/1.1.0 date=20200922 130
246 Illumina contig00122 len=130 cov=21.7 corr=0 origname=NODE_176_length_130_cov_21.666667_pilon sw=shovill-spades/1.1.0 date=20200922 130
259 Illumina contig00121 len=130 cov=25.7 corr=0 origname=NODE_175_length_130_cov_25.666667_pilon sw=shovill-spades/1.1.0 date=20200922 130
231 Illumina contig00123 len=129 cov=49.0 corr=0 origname=NODE_178_length_129_cov_49.000000_pilon sw=shovill-spades/1.1.0 date=20200922 129
285 Illumina contig00124 len=129 cov=42.0 corr=0 origname=NODE_179_length_129_cov_42.000000_pilon sw=shovill-spades/1.1.0 date=20200922 129
172 Illumina contig00125 len=128 cov=97.0 corr=0 origname=NODE_181_length_128_cov_97.000000_pilon sw=shovill-spades/1.1.0 date=20200922 128