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Allele information - SPNE01130 (rafA): 14

Provenance/meta data

locus
SPNE01130 (rafA)
allele
14
sequence
ATGGGAGTTA GGATAGAGAA TAATCTATTT TATGTTGAGA GTAAAAATCT AAGTTTGATT ATTGAAAATC GAAATGGCTA CTTACTTTTG AAACATTTAG GAAAGACTAT TAAGAACTAT AAAGGTTCCA ATAGTGTTTA TGAACGAGAC CATGCCTTTT CAGGAAATCC AACGGCTACT AATCGAACCT TTAGTTTAGA TACTCAGCGA CAGATTTTTG GACAACATGG CTTAGGAGAT TTTAGGAAAC CAACCATACA GGTTCAGCAT AGTGTAACTG AAGTAACAGA CTTTCGATTT GTAGAAGCAA AGATTTTAAA AGGTCAGAAT GGTCCACAGG GCTTACCTTC TCCACATAGC ATGGACGATA CAGAGACTCT TGTCTTAATG TTAGAAGATT CTAAGGCTCA ACTTAGTCTG ACTTTGTATT ATACTACTTT TAATAATGAT GCGACTATTG CTAGCTACAG TAAATTAGAT AATAATAGTA ATCAGGAAGT TGTCATCCAT AAAGATTTTT CTTTTATGGC TGATTTTCCA GCTGCAGATT ACGAAATAGT AACTCTGCAG GGTGCTTATG CTCGTGAAAA GACTGTTAGA CGTCAACAGG TAGAACAAGG AATCTTTTCG ATTAGCTCAA ACCGAGGTGC TTCTGGTCAT GCTCAAACAC CAGCTCTTCT ACTATGCGAA CAAGGAGTCA CAGAGGATGC TGGGAATGTG TTTGCTATTC AACTAATGTA TAGTGGCAAC TTTGAAGCTT TTGTTCAAAA AAATCAATTG AATGAAGTTC GGGTGGCTAT TGGCATTAAT CCAGAAAACT TTTCTTGGAA GTTAGCTCCT GAGGAATACT TTGAAACACC GGTAGCTTTA GTGACCCATT CAGATCAGGG ATTAACTGGT ATTAGTCATG AAAGTCAGAA TTTTGTACTG AAGCACATTA TGCTAAGTGA ATTTTCTAAA AAAGAACGTC CAATTCTAAT CAATAACTGG GAAGCTACTT ACTTTGACTT TCAGAGAGAA AAACTGTTAG AGTTAGCAGA TGAAGCTAAG AAAGTTGGCA TTGAACTTTT TGTATTAGAT GATGGTTGGT TTGGCAATCG TTTTGATGAT AATCGTGCTT TAGGTGATTG GGTTGTTAAT GAGGAAAAAC TGGGTGGAAG TCTAGAAAGT CTGATTTCAG CTATCCATGA AAGAGGTTTG CAGTTTGGAC TTTGGTTAGA ACCCGAAATG ATTTCTGTAG ATAGTGATTT GTATCGTCGA CATCCTGACT GGGCTATTCA GGTTCCTGAC TATGAGCATA CTTATTCTCG GAATCAATTA GTACTTAATC TTGCCAATCC TCAGGTAGTA GAATACTTGA AAAGTGTCTT AGATCAACTC CTATCTTATC ATGATATTGA TTACATTAAA TGGGATATGA ACCGCAATAT CACTAAGCTA GGGAATGGAT TAACTTATCT AGAGACACAG ATGCAATCTC ATCAGTACAT GCTGGGGCTT TACGAACTCG TTTCTTATCT GACAGAGAAG CACAGCCATA TTCTCTTTGA GTCCTGCTCT GGTGGTGGTG GACGAAATGA TCTTGGTATG ATGCGCTATT TCCCACAAGT CTGGGCTAGT GATAATACTG ATGCCATTGC ACGTTTACCA ATTCAATACG GTTCATCCTA TCTCTATCCA ACCATTTCTA TGGGGGCTCA TGTGTCAGCA GTACCGAATC ATCAGATGGG ACGAATGACA CCATTAGAAA CACGTGGCCA TGTAGCAATG ATGGGAAATT TGGGCTATGA GCTTGATTTG ACAAATTTAT CAGATGAAGA GAAAGCTACG ATTGCTAATC AGGTGAACTT GTATAAAGAA TTACGACCAG TAGTTCAGTT AGGACAGCAG TATAGACTAA TTAATCCTGA TACTGCATCC AATGAAGCAG CTGTACAATT TAATTACGGA AATCAAACGA TTGTAACCTA CGTTCGCGTT TTATCTGTTG TAGAGACCAT GGAAACAACT TTAAAATTAA AAGATTTGGA TGAAGAGGGA CTATATGAAT TACAGGAAAA TGGCGAAGTT TACTCAGGTG CAGAACTAAT GTATGCGGGC CTAACTGTTA TCTTATCCCA AGGAGATTTT TTGAGTAGAC AGTATATTTT TAGAAGACTA TGA
length
2163
status
unchecked
date entered
2019-12-11
datestamp
2019-12-11
sender
Melissa Jansen van Rensburg, University of Oxford, UK
curator
Keith Jolley, University of Oxford, UK

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.