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Allele information - SPNE01018 (secA): 12

Provenance/meta data

locus
SPNE01018 (secA)
allele
12
sequence
ATGGCTAATA TTTTAAAAAC AATTATCGAA AATGATAAAG GAGAAATCCG TCGTCTGGAA AAGATGGCTG ACAAGGTTTT CAAATACGAA GACCAAATGG CTGCTTTGAC TGACGACCAA CTAAAAGCAA AAACAGTTGA ATTTAAGGAA CGTTATCAAA ATGGAGAATC ACTGGATTCA TTGCTTTACG AAGCATTTGC GGTTGTCCGT GAAGGTGCCA AACGTGTCCT AGGTCTCTTC CCTTATAAGG TTCAGGTCAT GGGGGGGATT GTTCTTCACC ATGGTGACGT GCCAGAGATG CGTACAGGGG AAGGGAAAAC CTTGACTGCG ACCATGCCGG TATACCTCAA TGCCCTTTCA GGTAAAGGGG TTCACGTAGT TACGGTTAAT GAATACCTGT CAGAACGTGA CGCGACTGAG ATGGGTGAAT TGTACTCTTG GCTTGGTTTG TCAGTAGGGA TTAACTTGGC TACCAAATCT CCAATGGAGA AAAAAGAAGC CTATGAGTGT GATATTACTT ACTCAACTAA CTCAGAAATC GGATTTGACT ACCTTCGTGA CAACATGGTC GTTCGCGCTG AAAACATGGT ACAACGTCCG CTTAACTATG CCTTGGTCGA TGAGGTTGAC TCTATCTTGA TTGACGAGGC TCGTACACCT TTGATTGTAT CAGGTGCCAA TGCGGTTGAA ACCAGTCAGT TGTATCACAT GGCAGACCAC TATGTAAAAT CTTTGAACAA AGATGACTAC ATCATCGATG TGCAGTCTAA GACTATTGGT TTGTCTGATT CAGGGATTGA CAGGGCTGAA AGCTACTTCA AACTTGAAAA CCTCTATGAC ATCGAAAACG TGGCTTTGAC CCACTTTATC GATAACGCCC TTCGTGCCAA CTACATCATG CTTCTCGATA TTGACTATGT GGTGAGCGAA GAGCAAGAAA TCTTGATTGT CGACCAATTT ACAGGTCGTA CCATGGAAGG TCGTCGTTAT TCTGATGGAT TGCACCAAGC TATTGAAGCC AAAGAAGGTG TGCCAATCCA GGATGAAACT AAGACATCTG CCTCAATCAC GTACCAAAAC CTTTTCCGTA TGTACAAGAA ATTGTCTGGT ATGACGGGTA CAGGTAAGAC TGAGGAAGAA GAATTCCGTG AAATCTACAA CATTCGTGTT ATTCCAATCC CAACAAACCG TCCTGTTCAA CGTATTGACC ACTCAGACCT TCTTTATGCA AGTATAGAAT CTAAGTTTAA AGCGGTTGTC GAAGACGTTA AGGCTCGTTA CCAAAAGGGT CAACCTGTCT TGGTTGGTAC AGTAGCGGTT GAAACTAGTG ACTACATTTC TAAGAAATTG GTTGCAGCTG GTGTTCCTCA CGAAGTCTTG AATGCCAAAA ACCACTATAG AGAAGCCCAA ATCATCATGA ATGCTGGTCA ACGTGGTGCC GTTACCATCG CAACCAACAT GGCGGGTCGT GGTACCGACA TCAAGCTTGG TGAAGGTGTT CGTGAACTTG GAGGACTTTG TGTTATTGGT ACAGAACGTC ATGAAAGTCG TCGTATCGAT AACCAGCTTC GTGGACGTTC AGGTCGTCAA GGAGATCCAG GTGAGTCACA ATTCTACCTA TCTCTTGAAG ATGATTTGAT GAAACGTTTT GGTTCTGAAC GCTTGAAGGG AATCTTTGAA CGCTTGAACA TGTCTGAAGA GGCGATTGAG TCTCGCATGT TGACGCGTCA GGTTGAAGCA GCTCAGAAAC GTGTCGAAGG AAATAACTAC GATACCCGTA AACAAGTCCT TCAATACGAC GATGTCATGC GTGAACAACG TGAGATTATC TATACTCAAC GTTATGATGT CATTACTGCA GACCGTGACT TGGCACCTGA AATTCAGGCA ATGATCAAAC GCACGATTGG TCGTGTCGTT GACGGTCATG CGCGTGCTAA ACAAGATGAG AAACTAGAGG CAATTTTGAA CTTCGCTAAG TATAACTTGC TTCCTGAAGA TTCTATTACG ATGGAAGACT TGTCAGGCTT GTCTGATAAG GCCATCAAGG AAGAGCTTTT CCAACGTGCC TTGAAGGTTT ACGATAGTCA GGTTTCAAAA CTACGCGATG AAGAAGCAGT TAAAGAATTC CAAAAAGTTT TGATTCTACG AGTGGTGGAT AACAAGTGGA CAGATCATAT CGATGCCCTT GATCAATTGC GTAACGCGGT TGGACTTCGT GGCTATGCTC AGAACAACCC TGTTGTTGAG TATCAGGCAG AAGGTTTCCG TATGTTTAAT GATATGATTG GTTCGATTGA GTTTGATGTG ACACGCTTGA TGATGAAAGC ACAAATTCAT GAACAAGAAA GACCACAGGC AGAACGTCAT ATCAGTACAA CAGCGACTCG CAATATCGCT GCTCACCAAG CAAGTATGCC AGAAGATTTG GATTTGAGCC AGATTGGACG CAATGAACTT TGCCCATGTG GTTCTGGTAA GAAATTTAAA AACTGTCACG GTAAAAGACA ATAA
length
2514
status
unchecked
date entered
2019-12-11
datestamp
2019-12-11
sender
Melissa Jansen van Rensburg, University of Oxford, UK
curator
Keith Jolley, University of Oxford, UK

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.