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Allele information - SPNE00739 (smc): 4

Provenance/meta data

locus
SPNE00739 (smc)
allele
4
sequence
ATGTATTTAA AGGAAATCGA AATTCAGGGA TTCAAGTCTT TTGCTGATAA GACCAAGGTC GTCTTTGACC AAGGTGTGAC GGCAGTCGTT GGACCCAATG GATCTGGAAA GTCGAATATT ACAGAAAGTC TGCGATGGGC CTTGGGAGAG TCTAGTGTCA AGAGTCTCCG TGGGGGCAAG ATGCCGGATG TCATCTTTGC TGGAACAGAA AGTCGTAAAC CGCTTAATTA TGCTTCTGTA GTTGTGACTC TGGATAATCA TGATGGATTT ATCAAGGATG CAGGTCAAGA AATCAGAGTA GAACGCCATA TCTATCGTAG TGGGGATAGT GAATACAAAA TTGACGGCAA GAAAGTTCGT CTTCGTGATA TTCATGATCT CTTCTTGGAC ACAGGTTTGG GACGAGATTC CTTTTCCATC ATTTCCCAAG GCAAGGTTGA GGAGATTTTT AATTCTAAGC CTGAGGAACG CCGAGCTATT TTTGAAGAAG CTGCAGGAGT TTTAAAATAC AAGACTCGTA GAAAAGAAAC TGAGAGCAAA TTGCAACAAA CTCAGGATAA TCTGGACCGC TTAGAGGACA TTATCTACGA GTTGGATAAT CAAATCAAGC CTCTTGAGAA GCAAGCTGAG AATGCCCGTA AGTTTTTAGA CTTGGAAGGA CAACGTAAGG CTATTTATTT AGACGTGCTG GTTGCTCAAA TCAAGGATAA TAAGGCTGAA CTAGACTCGA CAGAAGAAGA GTTGGCTCAG GTTCAGGAAC TCTTGACTAG TTATTACCAA AAGCGTGAAA AATTAGAAGA GGAAAATCAA ACTCTTAAAA AGCAACGCCA AGATTTGCAG GCTGAAATGG CCAAAGACCA AGGCAGTTTG ATGGATTTGA CCAGTCTGAT TAGTGACTTA GAGAGAAAAT TAGCCCTATC GAAACTGGAA TCTGAGCAAG TAGCCCTCAA TCAACAGGAA GCACAAGCCC GTTTGGCTAC TTTGGAGGAT AAGAGAAGTT CACTCAGCCA AGAAAAATCT GATAAAGAAA GCTCTTTAGC TCTGTTAGAG GGAAATCTAG TCCAAAATAA TCAAAAACTC AATCGTTTAG AAGCTGAATT GCTGGCTTTC TCAGACGATC CTGATCAGAT GATTGAGCTC TTACGTGAAC GCTTTGTAGC TCTTTTACAA GAAGAAGCGG ATGTCTCAAA CCAGTTGACC CGTATTGAGA ATGAGTTGGA AAATAGTCGT CAGCTTTCTC AAAAACAAGC AGATCAACTA GAAAAGCTGA AAGAGCAATT GGCTATAGCT AAAGAGAAGG CTAGTCAGCA AAAGGAAGAG CTTGAAACTG CCAAGGAGCA GGTTCAGAAA TTATTGGCTG ACTACCAAGC TATTGCCAAG GAGCAAGAGG AGCAGAAAAC TTCCTATCAA GCTCAACAAA GCCAACTCTT TGACCGTCTG GATAATCTCA AAAACAAGCA GGCCAGAGCT CAAAGTTTGG AAAATATCCT GAGAAATCAT AGTAACTTTT ATGCAGGTGT TAAGAGTGTT CTCCAAGAAA AAGATCGCCT AGGTGGGATT ATTGGTGCAG TCAGTGAGCA TCTGACCTTT GATATGCATT ATCAAACTGC CCTAGAAATT GCACTTGGAG CGAGTAGTCA GCACATTATT GTAGAAGATG AGAATGCGGC AACCAAAGCC ATTGATTTCC TCAAACGAAA CAGAGCCGGT CGTGCAACCT TTCTTCCTTT GACCACTATT AAGGCGCGTA CGATTTCTAG TCAGAACCAA GATGCTATCG CTGTAAGCCC AGGTTTCCTT GGGATGGCAG ATGAGTTAGT TACTTTCGAT ACTAGACTGG AAGCCATTTT CAAGAACTTG CTAGCTACGA CGGCTATCTT TGATACCGTA GAACATGCGC GTGAAGCTGC TCGACAAGTT CGTTATCAGG TTCGCATGGT GACATTGGAT GGGACAGAGC TTCGTACAGG TGGTTCCTAT GCAGGTGGAG CCAATCGTCA GAACAACAGC ATCTTCATCA AGCCAGAACT GGAGCAATTA CAAAAAGAAA TTGCTGAAGA AGAAGCAAGC TTGGATTCAG AAGAAGTGGC TTTGAAGACC TTGCAAGATG AGATGGCCAG ATTGACCGAG TCATTAGAAG CTATTAAATC TCAAGGAGAG CAGGCACGTA TTCAGGAGCA AGGCTTGTTC CTCGCTTATC AGCAAACTAG TCAGCAAGTT GAAGAGCTAG AAACTCTTTG GAAACTCCAA GAAGAGGAAA TAGATCGTCT TTCCGAGGGA GATTGGCAAG CGGATAAGGA AAACTGCCAA GAGCGTCTTG CTGCAATCGC CAGTGACAAG CAAAATCTGG AAGCTGAGAT TGAAGAGATT AAGTCTAACA AAAATGCCAT CCAAGAACGC TATCAAAACT TGCAGGAAGA GCTAGCGCAA GCTCGTTTGC TTAAGACAGA ACTGCAAGGG CAAAAACGTT ATGAAGTTGC TGATATTGAG CGTTTAGGCA AGGAATTGGA TAATCTTAAT ATCGAACAAG AAGAAATCCA GCGCATGCTC CAAGAAAAAG TTGACAATCT TGAGAAAGTT GATACGGATT TGCTCAATCA GCAGGCCGAA GAAGCCAAAA CTCAGAAAAC AAATCTCCAA CAAGGTTTGA TTCGCAAGCA GTTTGAGTTG GATGATATTG AAGGGCAGCT GGATGATATT GCTAGTCATT TGGATCAGGC TCGCCAGCAG AATGAGGAGT GGATTCGCAA GCAAACACGT GCTGAAGCTA AGAAAGAAAA GGTCAGCGAA CGCTTGCGCC ATCTACAAAG TCAATTAACA GACCAGTACC AGATTAGCTA TACTGAAGCT CTAGAAAAAG CGCATGAATT GGAAAACCTC AATCTGGCAG AGCAAGAAGT TAAGGATTTA GAGAAGGCTA TTCGCTCACT GGGTCCTGTC AATATAGAAG CTATTGACCA GTACGAAGAA GTTTACAACC GTCTGGACTT TCTAAATAGT CAGCGAGATG ATATTTTGTC AGCGAAAAAT CTGCTCCTTG AAACCATTAC AGAGATGAAT GATGAGGTTA AGGAACGCTT TAAATCAACC TTTGAAGCTA TTCGTGAGTC CTTTAAAGTG ACCTTTAAGC AGATGTTTGG CGGAGGTCAG GCAGACTTGA TATTGACTGA GGGCGACCTT TTAACAGCTG GTGTGGAGAT TTCTGTTCAA CCTCCAGGTA AGAAAATCCA GTCGCTTAAC CTCATGAGTG GTGGTGAAAA AGCTCTATCG GCTCTTGCCT TGCTCTTCTC CATTATTCGT GTCAAGACTA TTCCATTTGT TATCTTGGAT GAGGTGGAAG CTGCGCTGGA TGAAGCTAAT GTTAAACGTT TTGGGGATTA CCTCAACCGC TTTGACAAGG ACAGCCAGTT CATCGTCGTA ACCCACCGTA AGGGAACCAT GGCAGCGGCT GATTCTATCT ATGGAGTGAC CATGCAAGAA TCAGGTGTCT CAAAAATTGT TTCAGTTAAG TTAAAAGATT TAGAAAGTAT TGAAGGATGA
length
3540
status
unchecked
date entered
2019-12-11
datestamp
2019-12-11
sender
Melissa Jansen van Rensburg, University of Oxford, UK
curator
Keith Jolley, University of Oxford, UK

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.