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Allele information - SPNE00663 (ligA): 278

Provenance/meta data

locus
SPNE00663 (ligA)
allele
278
sequence
ATGAATAAAA GAATGAATGA GTTAGTCGCC TTGCTCAATC GCTATGCGAC TGAGTACTAT ACCAGTGATA ATCCGTCGGT TTCAGACAGT GAGTATGACT GTCTTTATCG TGAGTTGGTC GAGTTAGAAA CTGCCTATCC AGATCAAGTG TTAGCAGACA GTCCGACCCA TCGTGTTGGT GGCAAAGTCT TAGATGGTTT TGAAAAATAC AGTCATCAGT ATCCTCTTTA TAGTTTGCAG GATGCTTTTT CACGTGAGGA GCTTGAAGCT TTTGACGCGC GTGTTCGTAA GGAAGTGACT CATCCAACCT ATATTTGTGA GCTGAAAATC GATGGCTTAT CTATTTCTCT TACTTATGAA AAGGGGACTT TAGTTGCTGG GGCAACACGT GGTGATGGTT CTATTGGGGA AAATATCACA GAAAATCTTA AGCGTGTTAA GGACATTCCA TTGATCTTGC CAGAAGAACT AGATATCACG GTTCGTGGGG AATGTTATAT GCCACGCGCT TCTTTTGACC AGGTTAACCA AGCTCGCCAA GAAAATGGAG AGCCTGAATT TGCCAATCCT CGTAATGCGG CGGCAGGCAC CCTGCGACAG CTGGATACAG CAGTAGTAGC CAAGCGCAAT CTTGCAACGT TTCTCTATCA AGAAGTCAGC CCTTCAACTC GTGACAGCCA AGAAAAGGTT TTGAAGCACC TAGAACAGCT TGGTTTTGTA GTCAATCCTA AGCGGATTTT GGCTGAAAGC ATGGATGAGA TTTGGAATTT TATCCAAGAA GTAGGAGAGG AACGGGAGAA TCTGCCTTAT GATATCGATG GGGTGGTGAT CAAGGTCAAT GACCTAGCAG GTCAAGAAGA ACTTGGTTTT ACCGTTAAGG CTCCAAAGTG GGCAGTAGCC TACAAGTTCC CTGCTGAGGA AAAAGAAGCT CAACTCTTGT CAGTTGATTG GACAGTTGGT CGTACGGGTG TTGTAACCCC AACTGCGAAT CTAACACCAG TACAACTAGC TGGTACAACT GTTAGCCGTG CAACTCTGCA CAATGTGGAT TATATTGCTG AAAAAGATAT TCGTAAGGAC GACACGGTCA TCGTCTATAA GGCTGGTGAC ATCATCCCTG CTGTTTTACG TGTGGTAGAG TCCAAACGGG TTTCTGAAGA AAAACTAGAT ATCCCTACAA ACTGTCCAAG TTGTAACTCT GATTTGTTGC ACTTTGAAGA TGAAGTGGCC CTCCGTTGTA TCAATCCGCG CTGTCCTGCT CAAATCATGG AAGGCTTGAT TCACTTTGCC TCTCGAGATG CCATGAATAT TACAGGGCTT GGTCCATCTA TTGTTGAGAA ACTCTTTGCT GCAGACCTAG TCAAGGATGT GGCAGATATT TACCGTTTGA AAGAAGAAGA TTTCCTCCTT TTAGAGGGGG TTAAGGAAAA GTCTGCTTCT AAACTGTATC AAGCCATTCA AGCATCTAAG GAAAACTCTG CTGAAAAACT CTTGTTTGGT TTGGGAATTC GCCATGTCGG CAGTAAGGCT AGCCAGCTCT TACTCCAACA TTTCCACTCG ATTGAAAATC TAGCTCAGGC AGATCCAGAC GAAGTGGCTA GTATTGAAAG TCTAGGTGGT GTGATTGCCA AGAGTCTTCA GACTTACTTT GCGACAGAAG GCTCTGAAAT TCTTCTCAGA GAATTAAAAG AAGCTGGGGT CAATCTGGAC TATAAAGGTC AGACAGTAGT AGCGGATGCA GCCTTGTCAG GTTTGACAGT GGTATTGACT GGAAAATTGG AACGACTCAA GCGCTCAGAA GCTAAAAGTA AACTCGAAAG TCTGGGGGCC AAAGTGACAG GCAGTGTTTC TAAAAAGACT GACCTCGTCG TTGCAGGAGC AGATGCTGGA AGTAAACTTC AAAAAGCACA AGAACTTGGA ATCGAGGTTC GAGATGAGGC ATGGCTAGAA AGTTTGTAA
length
1959
status
WGS: automated extract (BIGSdb)
date entered
2020-02-12
datestamp
2020-02-12
sender
Melissa Jansen van Rensburg
curator
Melissa Jansen van Rensburg, University of Oxford, UK

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.