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Allele information - SPNE00663 (ligA): 115

Provenance/meta data

locus
SPNE00663 (ligA)
allele
115
sequence
ATGAATAAAA GAATGAATGA GTTAGTCGCC TTGCTCAATC GCTATGCGAC TGAGTACTAT ACCAGCGACA ATCCGTCGGT TTCAGATAGT GAGTATGACC GCCTTTACCG AGAGTTGGTT GAGTTAGAAA CTGCCTATCC AGATCAAGTG CTAGCAGACA GTCCGACCCA TCGTGTTGGT GGCAAGGTTT TAGATGGTTT TGAAAAATAC AGTCATCAGT ATCCTCTTTA TAGTTTGCAG GATGCTTTTT CACGTGAGGA GCTTGAAGCT TTTGATGCGC GTGTTCGTAA GGAAGTGCCT CATCCAACCT ATATTTGTGA GTTGAAAATC GATGGCTTAT CTATCTCGCT GACTTATGAA AAGGGGATTC TAGTTGCAGG TGCAACACGT GGAGACGGTT CTGTTGGGGA GAATATAACG GAAAACCTCA AACGTGTTAA GGACATTCCT TTGACCTTGC CAGAAGAACT TGATATTACA GTTCGTGGGG AATGTTACAT GCCACGCGCT TCTTTTGACC AGGTCAACCA AGCTCGTCAA GAAAATGGAG AGCCTGAATT TGCTAATCCT CGTAATGCAG CAGCAGGAAC CTTACGACAG TTAGATACAG CTGTAGTTGC CAAGCGCAAT CTTGCAACGT TTCTCTATCA AGAAGCCAGC CCTTCAACTC GTGATAGCCA AGAAAAGGTT TTGAAGCACC TAGGACAGCT CGGTTTTGTG GTTAATCCTA AGCGAATCTT GGCTGAAAAC ATAGATGAAA TCTGGAATTT TATCCAAGAA GTAGGACAGG AACGGGACAA TCTGCCTTAT GATATCGATG GGGTGGTGAT CAAGGTCAAC GACCTAGCAA GTCAAGAAGA ACTTGGTTTT ACCGTCAAGG CTCCAAAGTG GGCAGTAGCC TACAAGTTCC CAGCTGAAGA AAAAGAAGCT CAACTCTTAT CAGTTGATTG GACAGTTGGC CGTACGGGTG TTGTAACCCC GACTGCCAAT CTGACCCCTG TTCAGCTTGC TGGGACAACT GTTAGCCGTG CGACCCTGCA CAATGTGGAT TATATTGCTG AAAAAGATAT CCGCAAAGAC GACACGGTTA TCGTCTATAA GGCTGGCGAC ATTATCCCTG CCGTTTTACG TGTAGTAGAG TCCAAGCGTA TTTCTGAAGA GAAACTAGAT ATTCCAACAA ATTGTCCAAG TTGTAACTCT GACTTGTTGC ACTTTGAAGA TGAAGTGGCT CTCCGTTGTA TAAATCCGCG TTGCCCTGCT CAAATCATGG AAGGTTTGAT CCACTTTGCC TCTCGAGATG CCATGAATAT TACAGGCCTT GGTCCATCAG TAGTTGAGAA ACTATTTGCT GTCAATCTGG TCAAGGATGT GGCGGATATT TATCGTTTGA AAGAAGAAGA TTTCCTCCTT TTAGAGGGGG TTAAGGAAAA GTCTGCTTCT AAACTGTATC AAGCTATTCA AGCATCTAAG GAAAACTCTG CTGAAAAGCT CTTGTTTGGT TTGGGGATTC GTCATGTCGG AAGTAAGGCC AGTCAGCTGT TACTCCAACA TTTTCACTCT ATTGAAAATC TGGCTCAGGC AGATCCAGAG GAAGTGGCTA GTATTGAAAG TCTGGGTGGT GTGATTGCGA AGAGTCTCCA GACTTATTTT GCGACAGAAG GCTCTGAAAT TCTCCTCAGA GAATTGAAAG AAGCTGGGGT CAATCTGGAT TATAAAGGTC AGACTGTAGT GGCAGATGCG GCCTTGTCAG GTTTGACCGT GGTATTGACA GGAAAATTGG AACGACTCAA GCGCTCAGAA GCTAAAAGTA AACTCGAAAG TCTGGGTGCC AAAGTGACAG GTAGTGTTTC TAAAAAGACC GACCTCGTCG TGGTAGGTGC AGACGCTGGA AGTAAACTGC AAAAAGCACA AGAACTTGGT ATCCAGGTCA GAGATGAGGC ATGGCTAGAA AGTTTGTAA
length
1959
status
WGS: automated extract (BIGSdb)
date entered
2020-02-12
datestamp
2020-02-12
sender
Melissa Jansen van Rensburg
curator
Melissa Jansen van Rensburg, University of Oxford, UK

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.