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Allele information - SPNE00663 (ligA): 1

Provenance/meta data

locus
SPNE00663 (ligA)
allele
1
sequence
ATGAATAAAA GAATGAATGA GTTAGTCGCT TTGCTCAATC GCTATGCGAC TGAGTACTAT ACCAGCGATA ATCCCTCGGT TTCAGACAGT GAGTATGACC GCCTTTACCG TGAGTTGGTC GAGTTAGAAA CTGCTTATCC AGAGCAAGTG CTAGCAGACA GTCCGACTCA TCGTGTTGGT GGCAAGGTTT TAGATGGTTT TGAAAAATAC AGTCATCAGT ATCCTCTTTA TAGTTTGCAG GATGCTTTTT CACGTGAGGA GCTAGATGCT TTTGATGCGC GTGTTCGTAA GGAAGTGGCT CATCCGACCT ATATTTGTGA GCTGAAAATC GATGGCTTAT CTATCTCGCT GACTTATGAA AAGGGGATTT TGGTTGCTGG GGTAACACGT GGAGATGGTT CAATTGGTGA AAATATCACA GAAAACCTCA AGCGTGTTAA GGACATCCCT TTGACTTTGC CAGAAGAACT AGATATCACA GTTCGTGGGG AATGTTACAT GCCACGCGCT TCCTTTGACC AAGTTAACCA AGCGCGCCAA GAAAATGGAG AGCCTGAATT TGCTAATCCT CGTAATGCGG CAGCAGGAAC TCTGCGTCAG TTGGATACAG CAGTAGTTGC AAAGCGTAAT CTTGCAACGT TTCTCTATCA AGAAGCCAGT CCTTCAACTC GTGATAGCCA AGAAAAGGGT TTGAAGTACC TAGAACAACT AGGTTTTGTG GTCAATCCTA AGCGAATCTT GGCTGAAAAC ATAGATGAAA TCTGGAATTT TATCCAAGAA GTAGGACAGG AACGGGAAAA TCTACCTTAC GATATTGATG GAGTGGTAAT CAAGGTCAAC GACCTAGCAA GTCAAGAAGA ACTTGGTTTT ACCGTTAAGG CTCCAAAGTG GGCAGTAGCC TACAAGTTCC CTGCTGAAGA AAAAGAAGCT CAACTCTTAT CAGTTGACTG GACAGTTGGC CGTACCGGTG TTGTAACTCC AACTGCTAAT CTAACACCAG TACAACTTGC CGGTACGACT GTTAGCCGTG CGACCCTGCA CAATGTAGAT TATATTGCTG AAAAAGATAT CCGAAAAGAC GATACGGTCA TTGTATATAA GGCTGGTGAC ATCATCCCTG CCGTTTTACG TGTGGTAGAG TCCAAACGGG TTTCTGAAGA AAAACTAGAT ATCCCTACAA ACTGTCCAAG TTGTAACTCT GACTTGTTGC ACTTTGAAGA TGAAGTGGCC CTACGTTGTA TCAATCCGCG TTGCCCTGCT CAAATCATGG AAGGCTTGAT TCACTTTGCT TCTCGTGATG CTATGAATAT TACAGGCCTT GGTCCATCTA TTGTTGAGAA GCTTTTTGCT GCTAATTTAG TCAAGGATGT GGCGGATATT TATCGTTTGC AAGAAGAGGA TTTCCTCCTT TTAGAGGGGG TTAAGGAAAA GTCCGCTGCT AAACTGTATC AGGCTATCCA AGCATCAAAG GAAAATTCTG CCGAGAAGCT CTTATTTGGT TTGGGAATTC GTCATGTCGG AAGCAAGGCT AGTCAGCTTT TACTTCAATA TTTCCATTCA ATTGAAAATC TGTATCAGGC AGATTCAGAG GAAGTGGCTA GTATTGAAAG TCTAGGTGGC GTGATTGCCA AAAGTCTTCA GACTTATTTT GCGACAGAAG GCTCTGAAAT TCTGCTCAGA GAATTGAAAG AAACTGGGGT CAATCTGGAC TATAAAGGAC AGACGGTAGT AGCGGATGCG GCCTTGTCAG GTTTGACCGT GGTATTGACA GGAAAATTGG AACGACTCAA GCGCTCAGAA GCTAAAAGTA AACTCGAAAG TCTGGGTGCC AAAGTGACAG GTAGTGTTTC TAAAAAGACC GACCTCGTCG TGGTAGGTGC AGACGCTGGA AGTAAACTGC AAAAAGCACA AGAACTTGGT ATCCAGGTCA GAGATGAGGC ATGGCTAGAA AGTTTGTAA
length
1959
status
unchecked
date entered
2019-12-11
datestamp
2019-12-11
sender
Melissa Jansen van Rensburg, University of Oxford, UK
curator
Keith Jolley, University of Oxford, UK

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.