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Allele information - SPNE00539: 1

Provenance/meta data

locus
SPNE00539
allele
1
sequence
ATGATGGACA GTCCAAAAAA ATTAGGCTAT CACATGCCAG CAGAGTACGA ACCCCATCAT GGTACCCTCA TGATATGGCC GACTCGACCA GGATCATGGC CTTTTCAAGG AAAGGCTGCT AAAAGAGCAT TTACTCAGAT CATCGAGACC ATAGCAGAAG GGGAAAGAGT CTATCTTTTG GTGGAGCAGG CCTATCTATC TGAAGCCCAA TCCTATCTTG GAGACAAGGT TGTTTATTTA GACATTCCCA CCAATGATGC CTGGGCGCGT GATACTGGCC CAACCATTCT CGTCAATGAT AAAGGTAAGA AATTAGCCGT GGATTGGGCC TTCAATGCTT GGGGAGGCAC CTATGATGGT CTTTATCAAG ATTATGAAGA GGATGACCAA GTAGCCAGTC GTTTTGCTGA GGCCTTGGGA AGGCCTGTCT ATGATGCTAA ACCTTTTGTA CTGGAAGGAG GCGCAATCCA TAGCGATGGT CAAGGAACTA TTCTCGTAAC TGAAAGTTGC TTGCTTAGTC CTGGTCGCAA TCCTAACCTG ACTAAAGAGG AGATTGAAAA CACATTATTA GAAAGTCTTG GTGCTGAAAA AGTTATTTGG CTTCCTTATG GTATTTATCA GGATGAAACC AATGAACACG TCGATAATGT TGCTGCCTTT GTTGGTCCTG CTGAGCTTGT TTTGGCTTGG ACAGATGACG AAAATGATCC CCAGTATGCC ATGTCAAAAG CAGATCTCGA ACTCTTAGAA CAGGAAACAG ATGCAAAAGG TTGTCACTTC ACCATTCATA AATTGCCTAT CCCTGCAGTT CGACAAGTTG TGACAGAAGA AGATTTGCCA GGCTACATCT ATGAAGAAGG AGAAGAAAAG CGATACGCAG GTGAACGACT AGCAGCTTCC TACGTAAACT TTTATATCGC CAACAAGGCT GTCTTGGTTC CACAGTTTGA GGATGTAAAC GACCAAGTGG CCTTAGATAT CCTCAGCAAG TGTTTCCCAG ACCGTAAAGT TGTCGGAATA CCAGCCAGAG ATATTCTCTT AGGTGGTGGC AATATCCACT GTATCACCCA ACAAATTCCA GAATAG
length
1086
status
unchecked
date entered
2019-12-11
datestamp
2019-12-11
sender
Melissa Jansen van Rensburg, University of Oxford, UK
curator
Keith Jolley, University of Oxford, UK

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.