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Allele information - SPNE00322 (valS): 172

Provenance/meta data

locus
SPNE00322 (valS)
allele
172
sequence
ATGTCTAAAG AACTTTCATC TAAATACAAT CCAGCCGAGG TTGAGGCTGG TCGTTACCAA AAATGGCTTG ATGCCGATGT TTTCAAGCCT TCAGGCGATC AAAAGGCTAA GCCTTATTCA ATCGTTATTC CACCACCAAA CGTTACAGGT AAACTTCACC TTGGTCACGC TTGGGATACA ACTTTGCAAG ATATTATCAT CCGTCAAAAA CGCATGCAAG GTTTTGATAC CCTTTGGCTT CCTGGGATGG ACCACGCAGG GATTGCCACT CAGGCTAAGG TTGAGGAGCG CTTGCGTGGT GAGGGCATTT CCCGCTATGA CCTTGGTCGT GAGTCTTTCT TGACGAAAGT CTGGGAATGG AAAGACGAAT ATGCCACTAC CATCAAGGAA CAATGGGGCA AGATGGGGCT CTCTGTAGAC TATTCTCGTG AGCGTTTCAC TCTTGACGAA GGTTTGTCAA AAGCTGTTCG TAAGGTCTTT GTGAACCTTT ACAAGAAAGG CTGGATCTAC CGTGGTGAGT TTATCATCAA CTGGGACCCA GCAGCTCGCA CAGCCCTTTC TGATATTGAG GTGATTCACA AGGATGTGGA AGGTGCCTTC TACCACATGA ATTACATGCT GGAAGATGGT TCACGCGCCC TTGAAGTTGC TACAACTCGT CCTGAGACTA TGTTTGGGGA CGTTGCGGTT GCGGTTAATC CAGAAGACCC GCGCTACAAG GACTTGATTG GTAAAAACGT CATCCTTCCA ATCGCTAATA AACTCATCCC AATCGTTGGA GATGAGCACG CAGATCCTGA GTTTGGTACT GGTGTCGTGA AAATCACACC TGCCCACGAT CCAAATGACT TCTTGGTTGG CCAACGTCAT AACTTGCCAC AAGTCAATGT CATGAACGAC GACGGAACTA TGAATGAGCT TGCCTTTGAA TTTTCAGGCA TGGATCGTTT TGAAGCTCGT AAGGCAGTCG TTGCTAAGTT GGAAGAAATC GGTGCCCTTG TCAAAATCGA AAAACGTGTC CACAGTGTTG GTCACTCAGA ACGTACAGGT GTCGTAGTTG AGCCACGCTT GTCTACTCAA TGGTTCGTCA AGATGGACCA ATTGGCTAAG AACGCCATTG CCAACCAAGA CACAGAGGAC AAGGTCGAAT TCTACCCACC TCGTTTCAAC GATACCTTCC TTCAATGGAT GGAAAATGTC CACGACTGGG TTATCTCTCG TCAGCTTTGG TGGGGTCACC AAATCCCTGC CTGGTACAAT GCTGATGGTG AAATGTATGT CGGCGAAGAA GCTCCAGAAG GTGACGGATG GACTCAGGAC GAAGACGTCT TGGATACTTG GTTCAGTTCT GCCCTCTGGC CATTTTCAAC CATGGGCTGG CCTGAAGTCG ACTCAGAAGA CTTTAAACGT TATTTCCCAA CTTCAACCTT GGTAACAGGT TACGACATCA TCTTCTTCTG GGTGTCTCGT ATGATCTTCC AGTCATTGGA ATTCACAGGC CGTCAACCAT TCCAAAACGT CCTTATCCAC GGTCTTATTC GTGACGAGCA AGGACGCAAG ATGTCTAAGT CTCTCGGTAA CGGGATTGAC CCAATGGATG TTATCGAGAA ATACGGTGCC GATGCCCTTC GATGGTTCCT TTCAAACGGT TCTGCGCCAG GACAAGACGT GCGTTTCTCT TATGAGAAAA TGGATGCTTC ATGGAACTTT ATTAACAAGA TTTGGAACAT TTCTCGCTAT ATCCTCATGA ACAATGGAGG TTTGACGCTG GATGTGGCGC ATGACAATGT CACAAAAGTT GCAACAGGTG AGGCTGGTAA TGTGACGGAC CGCTGGATTC TCCACAACCT CAATGAAACG ATTGGAAAAG CAACTGCTAA CTTTGATAAG TTTGAGTTTG GTGTTGCTGG CCACATCCTC TACAACTTCA TCTGGGATGA ATTTGCGGAC TGGTATGTTG AGTTGACCAA GGAAGTCCTT TATAGCGATA ATGAAGAAGA TAAGGTAATT ACTCGATCTG TTCTCCTTTA CACTCTGGAC AAGATCCTTC GTCTCCTTCA CCCAATCATG CCATTCGTGA CAGAGGAAAT CTTTGGACAA ATCTCAGAAG GTTCTATCGT GACAGCTGCA TACCCAACTG TTAATCTAGC CTTTGAAGAC CTTGCGGCTC ACACTGGTGT AGAAAGTCTC AAAGACTTGA TCCGTGCCGT TCGTAATGCG CGTGCGGAAG TAAATGTAGC ACCAAGCAAA CCTATTACAA TCCTTGTTAA GACTAGCGAT AGTGACTTGG AAGCCTTCTT TAACAGCAAT GTCAACTACA TCAAACGCTT TACAAATCCA GAACATTTGG AAATCGCATC AACCATCCCT GCACCTGAAC TGGCTATGTC AAGTGTCATC ACAGGAGCAG AAATCTACCT GCCACTGGCC GATCTCCTCA ATGTTGAAGA AGAACTAGAT CGTCTCGACA AAGAACTCGC TAAATGGCAA AAAGAACTGG ACATGGTTGG TAAGAAACTC TCTAACGAAC GCTTCGTAGC CAACGCCAAA CCAGAAGTCG TCCAAAAAGA ACGCGACAAA CAAGCTGACT ACCAAGCCAA GTATGATGCG ACCGTAGCAC GTATTGATGA GATGAAGAAA CTTCGTTAA
length
2649
status
WGS: visually checked
date entered
2020-02-12
datestamp
2020-02-12
sender
Melissa Jansen van Rensburg
curator
Melissa Jansen van Rensburg, University of Oxford, UK

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.