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Allele information - SPNE00039 (strH): 401

Provenance/meta data

locus
SPNE00039 (strH)
allele
401
sequence
ATGAAACATG AAAAACAACA GCGTTTTTCT ATTCGTAAAT ACGCTGTAGG AGCAGCTTCT GTTCTAATTG GATTTGCCTT CCAAGCACAG ACTGTTGCAG CCGATGGAGT TACTACTACT ACAGAAAACC AACCGACCAT CCATACAGTT TCTGATTCCC CTCAATCATC CGAAAATCGG ACTGAGGAAA CACCTAAAGC AGAGCTTCAA CCAGAAACTC CAGCTACTGA TAAGGTAGCT AGTCTTCCAA AAACAGAAGA AAAACCACAA GAGGAAGTTA GTTCAACTCC TAGTGATAAA GCAGAGGTGG TAACTCCAAC TTCTGCTGAA AAAGAAACTG CTAATAAAAA GGCAGAAGAA GCTAGCCCTA AAAAGGAAGA AGCGAAAGAG GTTGATTCTA AAGAGTCAAA TACAGACAAG ACTGACAAGG ATAAACCAGC TAAAAAAGAT GAAGCGAAAG CAGAGGCTGA CAAACCGGAA ACAGAGGCAG GAAAGGAACG TGCTGCAACT GTAAATGAAA AACTAGCGAA AAAGAAAATT GTTTCTATTG ATGCTGGACG TAAATATTTC TCACCAGAAC AGCTCAAGGA AATCATCGAT AAAGCGAAAC ATTATGGCTA CACTGATTTA CACCTATTAG TCGGAAATGA TGGACTCCGT TTCATGTTGG ACGATATGAG CATCACAGCT AACGGCAAGA CCTATGCCAG TGACGATGTC AAACGCGCCA TTGAAAAAGG TACAAATGAT TATTACAACG ATCCAAACGG CAATCACTTA ACAGAAAGTC AAATGACAGA TCTGATTAAC TATGCCAAAG ATAAAGGTAT CGGTCTCATT CCGACAGTAA ATAGTCCTGG TCACATGGAT GCGATTCTCA ATGCCATGAA AGAATTGGGA ATCCAAAACC CTAACTTTAG CTATTTTGGG AAGGAATCAG CCCGTACTGT CAATCTTGAC AACGAACAAG CTGTCGCTTT TACAAAAGCC CTTATCGACA AGTATGCTGC TTATTTCGCG AAAAAGACTG AAATCTTCAA CATCGGACTT GATGAATATG CCAATGATGC GACAGATGCT AAAGGTTGGA GTGTGCTTCA AGCTGATAAA TACTATCCAA ACGAAGGCTA CCCTGTAAAA GGCTATGAAA AATTTATTGC CTACGCCAAT GACCTCGCTC GTATTGTAAA ATCGCACGGT CTCAAACCAA TGGCCTTTAA CGACGGTATC TACTACAATA GCGACACAAG CTTTGGTAGT TTTGACAAAG ACATCATCGT TTCTATGTGG ACTGGTGGTT GGGGAGGCTA CGATGTCGCT TCTTCTAAAC TACTAGCTGA AAAAGGTCAC CAAATCCTTA ATACCAATGA TGCTTGGTAC TACGTTCTTG GACGAAACGC TGATGGCCAA GGCTGGTACA ATCTCGATCA GGGGCTCAAT GGTATTAAAA ACACACCAAT CACTTCTGTA CCAAAAACAG AAGGAGCTGA TATCCCAATC ATCGGTGGTA TGGTAGCTGC TTGGGCTGAC ACTCCATCTG CACGTTATTC ACCATCACGC CTCTTCAAAC TCATGCGTCA TTTTGCAAAT GCCAACGCTG AATACTTCGC AGCTGATTAT GAATCTGCAG AGCAAGCACT TAACGAGGTA CCAAAAGACC TGAACCGTTA TACTGCAGAA AGCGTCGCGG CCGTAAAAGA AGCTGAAAAA GCTATTCGCT CTCTCGATAG CAACCTTAGC CGTGCCCAAC AAGATACGAT TGATCAAGCC ATTGCTAAAC TTCAAGAAAC TGTCAACAAC TTGACCCTCA CGCCTGAAGC TCAAAAAGAA GAAGAAGCTA AACGTGAGGT TGAAAAACTT GCCAAAAACA AGGTAATCTC AATCGATGCT GGACGCAAAT ACTTTACTCT GAACCAGCTC AAACGCATCG TAGACAAGGC CAGTGAACTC GGATATTCTG ATGTCCATCT CCTTCTAGGA AATGACGGAC TTCGCTTTCT ACTCGATGAT ATGACCATTA CTGCCAACGG AAAAACCTAT GCTAGTGATG ACGTTAAAAA AGCTATTATC GAAGGAACTA AAGCTTACTA CGACGATCCA AACGGTACTA CACTAACACA GGCAGAAGTG ACAGAGCTAA TTGAATACGC TAAATCTAAG GACATCGGTC TCATCCCAGC TATTAACAGT CCAGGTCACA TGGATGCTAT GCTGGTTGCC ATGGAAAAAT TAGGTATTAA AAATCCTCAA GCCCACTTTG ATAAAGTTTC AAAAACAACT ATGGACTTGA AAAACGAAGA AGCGATGAAC TTTGTAAAAG CCCTCATCGG TAAATACATG GACTTCTTTG CAGGTAAAAC AAAGATTTTC AACTTTGGTA CTGACGAATA CGCCAACGAT GCGACTAGTG CCCAAGGCTG GTACTACCTC AAGTGGTATC AACTCTATGG CAAATTTGCC GAATATGCCA ACACCCTCGC AGCTATGGCC AAAGAAAGAG GGCTTCAACC AATGGCCTTC AACGATGGCT TCTACTATGA AGACAAGGAC GATGTTCAGT TTGACAAAGA TGTCTTGATT TCTTACTGGT CTAAAGGCTG GTGGGGATAT AACCTCGCAT CACCTCAATA CCTAGCAAGC AAAGGCTATA AATTCTTGAA TACCAACGGT GACTGGTACT ACATTCTTGG TCAAAAACCA GAAGATGGTG GTGGTTTCCT CAAGAAAGCT ATTGAGAATA CTGGAAAAAC ACCATTCAAT CAACTAGCTT CTACCAAATA TCCTGAAGTA GATCTTCCAA CAGTCGGAAG TATGCTTTCA ATCTGGGCAG ATAGACCAAG CGCTGAGTAC AAGGAAGAGG AAATCTTTGA ACTCATGACT GCCTTTGCAG ACCACAACAA AGACTACTTC CGTGCTAATT ATAATGCTCT CCGCGAAGAA TTAGCTAAAA TTCCTACAAA CTTAGAAGGA TATAGTAAAG AAAGTCTTGA GGCCCTTGAC GCAGCTAAAA CAGCTCTAAA TTACAACCTC AACCGTAATA AACAAGCTGA GCTTGACACA CTTGTAGCCA ACCTAAAAGC CGCTCTTCAA GGCCTCAAAC CAGCTGCAAC TCATTCAGGA AGCCTGGATG AAAATGAAGT GGCTGCCAAT GTTGAAACCA GACCAGAACT CATCACAAGA ACTGAAGAAA TTCCATTTGA AGTTATCAAG AAAGAAAATC CTAACCTCCC AGCTGGTCAG GAAAATATTA TCACAGCAGG AGTCAAAGGT GAACGAACTC ATTACATCTC TGTACTCACT GAAAATGGAA AAACAACAGA AACAGTCCTT GATAGCCAGG TAACCAAAGA AGTTATAAAC CAAGTGGTTG AAGTTGGCGC TCCTGTAACT CACAAGGGTG ATGAAAGTGG TCTTGCACCA ACTACTGAGG TAAAACCTAG ACTGGATATC CAAGAAGAAG AAATTCCATT TACCACAGTG ACTCGTGAAA ATCCACTCTT ACTCAAAGGA AAAACACAAG TCATTACTAA GGGCGTCAAT GGACATCGTA GCAACTTCTA CTCTGTGAGC ACTTCTGCCG ATGGTAAGGA AGTGAAAACA CTTGTAAATA GTGTCGTAGC ACAGGAAGTC GGAACTATGG TAACACATGT AGGCGATGAA AACGGACAAG CCGCTATTGC TGAAGAAAAA CCAAAACTAG AAATCCCAAG CCAACCAGCT CCATCAACTG CTCCTGCTGA GGAAAGCAAA GCTCTTCCTC AAGATCCAGC TCCTGTGGTA ATAGAGAAAA AACTTCCTGA AACAGGAACT CACGATTCTG CAGGACTAGT AGTCGCAGGA CTCATGGCCA CACTAGCAGC CTATGGACTC ACTAAAAGAA AAGAAGACTA A
length
3891
status
WGS: automated extract (BIGSdb)
date entered
2020-02-14
datestamp
2020-02-14
sender
Auto Definer
curator
Auto Definer

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.