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Allele information - SPNE00005 (mfd): 7

Provenance/meta data

locus
SPNE00005 (mfd)
allele
7
sequence
ATGGTGACCT TATTAGATTT ATTCTCAGAA AATGATCAGA TTAAAAAATG GCATCAAAAT TTAACAGATA AGAAAAGACA ACTAATACTT GGTTTATCAA CATCTACTAA GGCTCTTGCA ATTGCAAGCA GTTTAGAAAA AGAAGATAGG ATTGTGTTAT TGACGTCAAC TTATGGAGAA GCAGAAGGAC TTGTTAGTGA TCTTATATCT ATCTTGGGTG AGGAACTCGT CTATCCATTT TTGGTAGATG ATGCTCCTAT GGTGGAGTTT TTGATGTCTT CACAGGAAAA AATTATTTCA CGGGTTGAAG CCTTGCGTTT TTTGACTGAT TCATCTAAGA AAGGGATTTT AGTTTGTAAT ATCGTAGCAA GTCGATTGAT TTTACCGTCT CCCAATGCAT TCAAAGATAG TATTGTAAAA ATCTCAGTTG GTGAAGAATA TGATCAACAC GCGTTTATCC ATCAGTTAAA GGAAAATGGC TATCGAAAAG TTACTCAAGT ACAAACTCAG GGCGAATTTA GTCTTCGAGG AGATATTTTA GATATTTTTG AAATATCCCA GTTAGAACCT TGTCGAATTG AATTTTTTGG TGATGAAATT GATGGTATCA GGTCATTTGA AGTAGAAACA CAATTATCGA AAGAAAATAA GACAGAACTC ACTATCTTTC CAGCTAGTGA TATGCTTTTG AGAGAAAAGG ATTATCAACG AGGACAGTCA GCTTTAGAAA AACAAATTTC AAAAACTTTA TCACCTATTT TGAAATCATA CCTAGAAGAA ATTCTTTCAA GTTTTCACCA AAAACAAAGT CATGCAGACT CTCGGAAGTT TTTATCTTTG TGCTATGATA AGACATGGAC TGTCTTTGAT TATATTGAAA AAGATACTCC AATATTCTTT GATGATTATC AAAAATTGAT GAATCAGTAT GAAGTCTTTG AAAGAGACTT AGCGCAGTAC TTTACAGAAG AATTACAGAA TAGTAAAGCA TTTTCTGATA TGCAGTATTT TTCTGATATT GAACAAATCT ATAAAAAACA AAGTCCAGTG ACCTTTTTCT CTAATCTTCA AAAGGGTTTA GGAAATCTCA AATTTGACAA AATTTATCAA TTCAATCAAT ATCCTATGCA GGAATTTTTC AATCAGTTTT CTTTTCTAAA AGAAGAAATT GAACGATATA AAAAAATGGA TTACACCATT ATTCTGCAGT CTAGCAATTC AATGGGAAGT AAAACATTGG AGGATATGTT AGAGGAATAT CAGATTAAAT TGGATTCTAG AGATAAGACA AGTATCTGTA AAGAATCTGT AAATTTAATA GAGGGTAATC TCAGACATGG TTTTCATTTT GTAGATGAAA AGATTTTATT GATAACTGAA CATGAGATTT TTCAAAAGAA ATTAAAGCGT CGTTTTCGAA GACAACATGT TTCAAATGCA GAGAGATTAA AAGATTACAA TGAACTTGAA AAAGGGGACT ATGTTGTCCA TCATATCCAT GGGATTGGTC AATATCTAGG AATTGAAACC ATTGAAATCA AGGGAATTCA TCGTGATTAT GTTAGTGTCC AATACCAAAA TGGTGATCAA ATTTCTATCC CCGTGGAACA GATTCATCTA CTGTCCAAAT ATATTTCAAG TGATGGTAAA GCTCCAAAAC TCAATAAATT AAATGACGGT CATTTTAAAA AGGCCAAGCA AAAGGTTAAG AACCAGGTAG AGGATATAGC TGATGATTTA ATCAAACTCT ACTCTGAACG TAGTCAGTTG AAGGGTTTTG CTTTCTCAGC TGATGATGAT GATCAAGATG CCTTTGATGA TGCTTTCCCT TATGTTGAAA CGGATGATCA ACTTCGTAGT ATTGAGGAAA TCAAGAGGGA TATGCAGGCT TCTCAGCCAA TGGATCGACT TTTAGTTGGG GATGTTGGTT TTGGAAAGAC TGAAGTTGCT ATGCGTGCAG CCTTTAAAGC AGTCAATGAT CACAAACAGG TTGTCATTCT AGTTCCGACG ACGGTTTTAG CGCAACAGCA CTATACGAAT TTTAAGGAAC GATTCCAAAA TTTTGCAGTT AATGTTGATG TGTTGAGTCG CTTTAGAAGT AAAAAAGAGC AGACTGCAAC ACTTGAAAAA TTGAAAAACG GTCAAGTCGA TATTTTGATT GGAACACATC GTGTTTTGTC AAAAGATGTT GTGTTTGCTG ATTTGGGCTT GATGATTATT GATGAGGAAC AGCGATTTGG TGTCAAGCAT AAGGAAACTT TGAAAGAACT GAAGAAACAA GTGGATGCAC TAACCTTGAC CGCTACGCCA ATCCCTCGTA CCCTCCATAT GTCTATGCTG GGAATCAGAG ATTTGTCTGT TATTGAAACT CCGCCGACTA ATCGCTATCC TGTTCAGACC TATGTTTTGG AAAAGAATGA TAGTGTCATT CGTGATGCTG TCTTGCGTGA AATGGAGCGT GGAGGTCAAG TTTACTATCT TTACAACAAA GTTGACACAA TTGTTCAGAA GGTTTCAGAA TTACAGGAGT TGATTCCGGA GGCTTCGATT GGATATGTTC ATGGTCGAAT GAGTGAAGTC CAGTTGGAAA ATACTCTATT AGACTTTATT GAGGGACAAT ACGATATCTT GGTGACGACT ACTATTATTG AGACAGGGGT GGACATTCCA AATGCTAATA CTTTATTTAT TGAAAATGCG GACCATATGG GCTTGTCAAC CTTATATCAG TTAAGAGGAA GAGTCGGTCG TAGTAATCGT ATTGCTTATG CTTATCTCAT GTATCGTCCA GAAAAATCAA TCAGTGAAGT CTCTGAAAAG AGATTAGAAG CGATTAAAGG ATTTACAGAA TTGGGCTCTG GCTTTAAGAT TGCAATGCGA GATCTTTCGA TTCGTGGAGC AGGAAATCTT TTAGGAAAAT CCCAGTCTGG TTTCATTGAT TCTGTTGGTT TTGAATTGTA TTCGCAGTTA TTAGAGGAAG CTATTGCTAA ACGAAACGGT AATGCTAACG CTAACACAAG AACCAAAGGG AATGCTGAGT TGATTTTGCA AATTGATGCC TATCTTCCTG ATACTTATAT TTCTGATCAA CGACATAAGA TTGAAATTTA CAAGAAAATT CGTCAAATTG ACAACCGTGT CAATTATGAA GAGTTACAAG AGGAGTTGAT AGACCGTTTT GGAGAATACC CAGATGTAGT AGCCTATCTT TTAGAGATTG GTTTGGTCAA ATCATACTTG GACAAGGTCT TTGTTCAACG TGTGGAAAGA AAAGATAATA AAATTACAAT TCAATTTGAA AAAGTCACTC AACGACTGTT TTTAGCTCAA GATTATTTTA AAGCTTTATC CGTAACGAAC TTAAAAGCAG GCATCGCTGA GAATAAGGGA TTAATGGAGC TTGTATTTGA TGTCCAAAAT AAGAAAGATT ATGAAATTTT AGAAGGTCTG CTGATTTTTG GAGAAAGTTT ATTAGAGATA AAAGAGTCTA AGGAAAAAAA TTCCATTTGA
length
3510
status
unchecked
date entered
2019-12-11
datestamp
2019-12-11
sender
Melissa Jansen van Rensburg, University of Oxford, UK
curator
Keith Jolley, University of Oxford, UK

Profiles containing this allele

cgMLST

Isolate databases

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.