Salmonella genomes database
The Salmonella PubMLST database contains genome data for a wide range of Salmonella serovars. Loci have been defined to facilitate gene-by-gene analyses of genomic variation.
Option settings
- Set general options - including isolate table field handling.
- Set display and query options for locus, schemes or scheme fields.
General information
- Isolates: 18,641
- Last updated: 2019-12-05
- Defined field values
- Update history
- About BIGSdb
Export
- Export dataset
- Contigs
- Sequences - XMFA / concatenated FASTA formats
Third party tools
- GrapeTree - Visualization of genomic relationships
- iTOL - Phylogenetic trees with data overlays
- PhyloViz - Visualization and phylogenetic inference
- Microreact - Open data visualization and sharing for genomic epidemiology