Database status

Sequences

Total

311,182

Last updated

2023-03-22

Schemes

Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles.

• Capsule
  • Biosynthesis and activation of sialic acid
  • Capsular polysaccharide Biosynthesis
  • Serotype Ia
  • Serotype Ib
  • Serotype II
  • Serotype III
  • Serotype IV
  • Serotype IX
  • Serotype V
  • Serotype VI
  • Serotype VII
  • Serotype VIII
  • Synthesis of the group B carbohydrate
• Genetic Information Processing
  • Transcription
  • Translation
  • Amino Acid Metabolism
    • Amino Acid Metabolism
• Metabolism
  • Carbohydrate Metabolism
    • Ascorbate and Aldarate Metabolism
    • Fructose and Mannose Metabolism
    • Galactose Metabolism
    • Glycolysis
    • Pentose Phosphate Pathway
    • Starch and Sucrose Metabolism
    • TCA Cycle
  • Energy Metabolism
    • Oxidative phosphorylation
    • Photosynthesis
  • Lipid Metabolism
    • Fatty Acid Biosynthesis
  • Nucleotide Metabolism
    • Purine Metabolism
    • Pyrimidine Metabolism
• Mobile Genetic Elements
  • ICESag1962
  • IMESp2907
• Other Schemes
  • Antimicrobial Resistance
    • Aminoglycosides
    • Chloramphenicol
    • Macrolides, lincosamides, Streptogramins
    • Tetracyclines
  • Enzyme Toxins
    • Haemolysin Operon
    • Hyaluronidase Activity
  • Pilus Islands
    • PI-1
    • PI-2a
    • PI-2b
  • Regulators
    • Adherence Regulation
    • LysR family
    • Pilus Regulator
    • Transcriptional Regulator
  • Surface Proteins
    • Alp Family Proteins
    • C5a Peptidase
    • Fibrinogen Binding Proteins
• Typing
  • MLST
  • h_S.agalactiae cgMLST v1.0

Loci

2159 loci defined.