Plasmid MLST isolates database
The plasmid MLST isolate database contains data for plasmids and isolates representing incompatibility groups I1, HI1, HI2, F and N. The allele sequences and profiles are defined in the profiles/sequence definition database.
Option settings
- Set general options - including isolate table field handling.
- Set display and query options for locus, schemes or scheme fields.
General information
- Isolates: 1283
- Last updated: 2017-05-24
- Defined field values
- Update history
- About BIGSdb
Breakdown
Export
- Export dataset
- Sequences - XMFA / concatenated FASTA formats
Analysis
- Codon usage
- Presence/absence status of loci
- PhyloTree - Generate phylogenetic trees
- PhyloViz