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Sequence bin for 1708131

Contig summary statistics

Contigs
56
Total length
6,305,712
Minimum length
585
Maximum length
738,850
Mean length
112,602
N50 contig number
7
N50 length (L50)
360,814
N90 contig number
19
N90 length (L90)
106,134
N95 contig number
24
N95 length (L95)
50,053

Contig size distribution

Contig size distribution
Click to enlarge

Cumulative contig length

Cumulative contig length
SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionEMBL formatArtemis
802172IlluminaNODE_1_length_738850_cov_22.0186738850acsA 230784231173
PSEU0928 (gacS) 273171275948
PSEU1151 (imm2) 500432500692
802216IlluminaNODE_2_length_662939_cov_23.1954662939PSEU3294 (vgrG4a) 3432385
PSEU5090 (vgrG) 203485205857
PSEU5089 (pldB) 205854208091
PSEU5088 208092208973
BACT000060 (rpmE) 247080247295
mutL 383261383702
BACT000006 (rpsF) 396686397105
BACT000018 (rpsR) 397135397365
BACT000038 (rplI) 398293398739
PSEU4856 (retS) 480009482837
BACT000015 (rpsO) 606594606863
802197IlluminaNODE_3_length_483554_cov_22.2201483554BACT000049 (rplT) 50895445
BACT000064 (rpmI) 54695663
PSEU2774 (tse4) 3338933976
PSEU2775 (tsi4) 3398134418
BACT000061 (rpmF) 235655235837
802219IlluminaNODE_4_length_428815_cov_19.4019428815PSEU1656 159211160767
PSEU1657 (hsiB2) 160803161309
PSEU1658 (hsiC2) 161337162812
PSEU1659 (hsiF2) 162825163232
PSEU1660 (hsiG2) 163777165357
PSEU1661 (hsiH2) 165321166328
PSEU1662 (clpV2) 166335168968
PSEU1663 (sfa2) 168979170490
PSEU1664 (orfX) 170579170719
PSEU1666 (lip2) 171936172442
PSEU1667 (hsiJ2) 172439173770
PSEU1668 (dotU2) 173773174642
PSEU1669 (icmF2) 174658178185
PSEU1670 (stp1) 178185178913
ppsA 270626270995
PSEU1844 (tse1) 359451359915
PSEU1845 (tsi1) 359957360475
802212IlluminaNODE_5_length_370771_cov_25.6259370771BACT000021 (rpsU) 301299301514
PSEU0609 (trpE) 333398334876
trpE 334249334691
PSEU5582 (prtR) 335477336247
PSEU5583 (hol) 337771338118
PSEU5597 (lys) 338134338763
PSEU5598 (VF2) 339692340186
PSEU5600 (MF2) 342707343048
PSEU0638 343056343751
PSEU0639 343754344524
PSEU0640 344579345181
PSEU0641 345240348908
PSEU0649 (trpG) 352407353012
802173IlluminaNODE_6_length_367642_cov_23.2221367642PSEU3487 (tse5 or pdlA) 8764175
PSEU3488 (tli5) 42685302
BACT000065 (rpmJ) 118519118671
BACT000060 (rpmE) 118671118934
BACT000002 (rpsB) 177073177813
BACT000048 (rplS) 277913278263
BACT000016 (rpsP) 279613279864
guaA 311162311534
802176IlluminaNODE_7_length_360814_cov_22.695360814PSEU2586 (gacA) 145324145968
nuoD 244820245185
PSEU2683 290643291605
PSEU2684 (tse5) 301821305774
PSEU2702 (tse2) 326925327401
PSEU2703 (tsi2) 327411327644
802183 Illumina NODE_8_length_277565_cov_20.3241 277565
802194IlluminaNODE_9_length_267765_cov_28.3811267765PSEU0098 195396196433
PSEU0097 196430197629
PSEU0095 (vgrG1b) 198036200261
PSEU0094 (eagT6) 200515200949
PSEU0092 (tsi6) 202583202867
PSEU0091 (vgrG-1) 202982204913
PSEU0089 (tssG) 207661208707
PSEU0088 (tssF) 208671210530
PSEU0087 (tssE) 210527211036
PSEU0086 (tagJ) 211038211883
PSEU0085 (hcp1) 212051212539
PSEU0084 (vipB) 212615214111
PSEU0083 (vipA) 214124214642
PSEU0082 (tssA) 214731215765
PSEU0081 (fha1) 216133217626
PSEU0080 (tssJ) 217671218135
PSEU0079 (tssK) 218151219485
PSEU0078 (tssL) 219492220841
PSEU0077 (icmF) 221063224371
PSEU0076 (tagF) 224368225048
PSEU0075 (pppA) 225058225786
PSEU0074 (ppkA) 225794228892
PSEU0073 (tagT) 228889229608
PSEU0072 (tagS) 229608230807
PSEU0071 (tagR) 230800232512
PSEU0070 (tagQ) 232574233488
802207IlluminaNODE_10_length_267304_cov_24.3422267304BACT000056 (rpmA) 101051101308
BACT000050 (rplU) 101332101643
802208IlluminaNODE_11_length_257460_cov_21.3327257460BACT000042 (rplM) 128513128941
BACT000009 (rpsI) 128956129348
802166IlluminaNODE_12_length_212099_cov_26.8884212099aroE 1393814435
BACT000063 (rpmH) 4138241516
802195 Illumina NODE_13_length_207843_cov_26.1911 207843
802190 Illumina NODE_14_length_187743_cov_26.0592 187743
802211IlluminaNODE_15_length_135226_cov_21.136135226PSEU1508 129256129516
PSEU1509 (tli4) 129529130671
PSEU1510 (tle4) 130668132377
PSEU1511 (vgrG2a) 132374134902
802184IlluminaNODE_16_length_130100_cov_22.9809130100PSEU2358 7151371902
PSEU2359 (sfa3) 7201573100
PSEU2363 (hsij3) 7889480225
PSEU2364 (lip3) 8028580761
PSEU2365 (hsiB3) 8097081515
PSEU2366 (hsiC3) 8153883022
PSEU2367 (hcp3) 8309683593
PSEU2368 (hsiF3) 8360684031
PSEU2369 (hsiG3) 8401585808
PSEU2370 (hsiH3) 8577286788
PSEU2371 (clpV3) 8679089339
PSEU2374 9310693642
802188IlluminaNODE_17_length_122655_cov_23.8179122655PSEU3485 (tsi3) 8481285
PSEU3484 (tse3) 12822508
802185IlluminaNODE_18_length_114873_cov_22.6593114873PSEU3293 113537114352
802187IlluminaNODE_19_length_106134_cov_23.4676106134BACT000057 (rpmB) 5324053476
BACT000062 (rpmG) 5348853643
802204IlluminaNODE_20_length_92499_cov_22.975392499PSEU3295 7821219
802217 Illumina NODE_21_length_58397_cov_18.3217 58397
802165 Illumina NODE_22_length_57893_cov_23.5475 57893
802214IlluminaNODE_23_length_56612_cov_23.21556612BACT000040 (rplK) 57966227
BACT000030 (rplA) 62276922
BACT000039 (rplJ) 71217621
BACT000036 (rplL) 76908058
BACT000012 (rpsL) 1677017141
BACT000007 (rpsG) 1724117711
BACT000010 (rpsJ) 2124321554
BACT000032 (rplC) 2163722272
BACT000033 (rplD) 2228622888
BACT000052 (rplW) 2288523184
BACT000019 (rpsS) 2403424309
BACT000051 (rplV) 2432224654
BACT000003 (rpsC) 2466725353
BACT000045 (rplP) 2536525778
BACT000058 (rpmC) 2577825969
BACT000017 (rpsQ) 2597226238
BACT000043 (rplN) 2626226630
BACT000053 (rplX) 2664326957
BACT000034 (rplE) 2697727516
BACT000014 (rpsN) 2753027835
BACT000008 (rpsH) 2802528417
BACT000035 (rplF) 2842928962
BACT000005 (rpsE) 2932729827
BACT000059 (rpmD) 2983030006
BACT000044 (rplO) 3001030444
BACT000065 (rpmJ) 3180231918
BACT000013 (rpsM) 3204932405
BACT000011 (rpsK) 3242432813
BACT000004 (rpsD) 3283033450
BACT000046 (rplQ) 3451834907
802218 Illumina NODE_24_length_50053_cov_20.2973 50053
802209 Illumina NODE_25_length_49231_cov_23.9082 49231
802169 Illumina NODE_26_length_43235_cov_21.5908 43235
802182 Illumina NODE_27_length_41871_cov_20.7226 41871
802177 Illumina NODE_28_length_29518_cov_23.7369 29518
802206 Illumina NODE_29_length_26314_cov_25.2464 26314
802189 Illumina NODE_30_length_19411_cov_23.7784 19411
802164 Illumina NODE_31_length_17847_cov_24.7377 17847
802198 Illumina NODE_32_length_12351_cov_22.7675 12351
802167 Illumina NODE_33_length_10576_cov_25.3224 10576
802215 Illumina NODE_34_length_7049_cov_31.6227 7049
802196 Illumina NODE_35_length_5532_cov_81.1228 5532
802200 Illumina NODE_36_length_5279_cov_49.9583 5279
802178 Illumina NODE_37_length_2954_cov_51.7669 2954
802179 Illumina NODE_38_length_2167_cov_27.1897 2167
802202 Illumina NODE_39_length_1545_cov_28.122 1545
802181 Illumina NODE_40_length_1256_cov_48.3366 1256
802180 Illumina NODE_41_length_1234_cov_23.9431 1234
802174 Illumina NODE_42_length_1228_cov_54.8111 1228
802203 Illumina NODE_43_length_1188_cov_26.1847 1188
802193 Illumina NODE_44_length_1122_cov_64.2714 1122
802191 Illumina NODE_45_length_982_cov_55.8257 982
802213 Illumina NODE_46_length_938_cov_25.1615 938
802186 Illumina NODE_47_length_884_cov_46.214 884
802170 Illumina NODE_48_length_849_cov_51.5374 849
802199 Illumina NODE_49_length_847_cov_54.7069 847
802201 Illumina NODE_50_length_743_cov_52.2711 743
802210 Illumina NODE_51_length_701_cov_54.1446 701
802168 Illumina NODE_52_length_688_cov_41.1586 688
802192 Illumina NODE_53_length_665_cov_48.171 665
802171 Illumina NODE_55_length_658_cov_10.2637 658
802175 Illumina NODE_54_length_658_cov_18.8475 658
802205 Illumina NODE_57_length_585_cov_20.738 585