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Export allele sequences in XMFA/concatenated FASTA formats - Cutibacterium acnes locus/sequence definitions

This script will export allele sequences in Extended Multi-FASTA (XMFA) format suitable for loading into third-party applications, such as ClonalFrame.

Aligned Output is limited to 200 records; total output (records x loci) is limited to 1,000,000 sequences.

Please be aware that if you select the alignment option it may take a long time to generate the output file.

Select STs

Paste in list of ids to include, start a new
line for each. Leave blank to include all ids.

Include in identifier
Select loci
Options
  • Aligner:
Action