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Query sequences for Neisseria profile/sequence definitions database

Some loci have additional fields which are not searchable from this general page. Search for these at the locus-specific query page. Use this page also for access to the sequence analysis or export plugins.

Also note that some loci in this database have allele ids defined as text strings. Queries using the '<' or '>' modifiers will work alphabetically rather than numerically unless you filter your search to a locus that uses integer allele ids using the drop-down list.

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16 records returned. Click the hyperlinks for detailed information.

locusallele idsequencesequence lengthtype allelecommentsflags
gdh1109ATGTTCGAGCCGCTG ... GGCAGCCGCACCGCG501
gyrA313GGGCGCGCGCTGCCG ... CCCGAAACCGAAATC525
NEIS2166 (cseB)16ATGAAATCTAAGGAA ... TTATATGGAGATTGA639
NEIS2166 (cseB)17ATGAAATCTAAGGAA ... TTATATGGAGATTGA639
NEIS2167 (cseC)37ATGGAGATTGATACA ... ATAAATGAAAATTGA1461
NEIS2167 (cseC)38ATGGAGATTGATACA ... ATAAATGAAAATTGA1461
NEIS2169 (cseE)14ATGCCTAATATTAAT ... TTGGATATTGCTTAA851internal stop codon
NEIS2171 (cseG)17ATGAAAACTAACTTT ... ATTGATCATTATTAA949frameshift internal stop codon
NEIS2171 (cseG)18ATGAAAACTAACTTT ... ATTGATCATTATTAA948
NEIS2187 (csxA)43ATGATTATGAGCAAA ... CCTAGTGGACAATAA1460internal stop codon
NEIS2187 (csxA)45ATGATTATGAGCAAA ... CCTAGTGGACAATAA1460internal stop codon
NEIS2187 (csxA)46ATGATTATGAGCAAA ... CCTAGTGGACAATAA1461
penA882GACGGCGTTTTGCTG ... AAGCCACTGACCGCC402
penA883GACGGCGAATTGTTG ... AAGCCCCTGCCCGCC402
penA884GACGGCGTTTTGCTG ... AAACCTCTGACCAAT402
penA885GACGGCGTTTTACTG ... AAGCCCCTGACCGCC402