Database status
Isolates
- Total
- 91,221
- Last updated
- 2023-02-07
Schemes
Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles.
- Capsule
- Capsule Region A
- Capsule Region A - Serogroup A
- Capsule Region A - Serogroup B
- Capsule Region A - Serogroup C
- Capsule Region A - Serogroup E
- Capsule Region A - Serogroup H
- Capsule Region A - Serogroup L
- Capsule Region A - Serogroup W
- Capsule Region A - Serogroup X
- Capsule Region A - Serogroup Y
- Capsule Region A - Serogroup Z
- Commensal cps: Group 1
- Commensal cps: Group 2
- Commensal cps: Group 3
- Capsule Region B
- Capsule Region C
- Capsule Region D and D'
- Capsule Region A
- Genetic Information Processing
- Aminotransferase (transaminase)
- DNA Replication
- DNA topoisomerases
- Elongation factors
- Initiation Factors
- Termination Factors
- Transcription
- Transcription factors
- Helix-turn-helix
- Other transcription factors
- Transcription machinery
- Other transcription-related factors
- RNA polymerase
- Transcription factors
- Translation
- transfer RNA Biogenesis
- 3' processing and CCA adding factors
- 5' processing factors
- Aminoacyl-tRNA synthetases (AARSs)
- tRNA modification factors
- transfer RNA Biogenesis
- Genomic islands
- Lineage Schemes
- Lineage 23
- Lineage 44
- Lineage 5
- Metabolism
- Carbohydrate Metabolism
- Glycan Biosynthesis and Metabolism
- Nucleotide Metabolism
- N. gonorrhoeae AMR
- Peptidoglycan Biosynthesis
- Pilin
- Plasmids
- Restriction Modification Systems
- Typing
- MLST
- Finetyping antigens
- 16S
- Antigen genes
- Bexsero Antigen Sequence Typing (BAST)
- eMLST (20 locus partial genes)
- eMLST (20 locus whole genes)
- Human-restricted Neisseria cgMLST v1.0
- NG MAST v2.0
- N. gonorrhoeae cgMLST v1.0
- N. meningitidis cgMLST v1
- N. meningitidis cgMLST v2
- OMV peptide typing
- Ribosomal MLST
- rplF species
- N. gonorrhoeae Typing
- Other schemes
- Antibiotic resistance
- DNA replication
- DNA replication
- Factor H-binding protein
- GC OMV peptide typing
- Iron acquisition
- L3 cgMLST
- Methyltransferases
- Neisseria genus core genes
- Nucleotide excision repair
- OMV peptide
- Other RMS
- PorB_loop_peptides
- Protein glycosylation
- Secreted peptides
- Small regulatory RNAs
- tRNA molecules
Loci
3137 loci defined.