Allele information - CPF_RS13435: 19
Provenance/meta data
- locus
- CPF_RS13435
- allele
- 19
- sequence
- GTGGTTCAAT GGATTAGCCC TAAGGATAAT AGCATAGTAA TTGCATCAAA AGTTAAAATC TTAAGAAACA TAAAAGGAAT TAAATTCACT AAGCTATTAA ATGAAGAGGA ATTTAATGAT CTTTTAAGTA TGGTTTTAGG ACGCTTGAAA GAGATTGATA TTTGGGATAA ATGTTATGTA GTTAAATTAA AAGACGGTGA AGAAAAAATA ATAGATTACT ACAAAGAAAA TTTTGGTTTA ATAAAATACT TTGAAAATAA GGATAATCTT ATTTTTATAA TGAATAAAAA TGGAGAATTT AATATATTAC TGAATGAAGA AGAGCATATT GGGATAGAAT GTACAAATAG TGGATTAAGT TTAAGAGAAG TGTATTCTAA GGTAGATAAA TTAGATGACT TAATTGAAGA AAAAATACAC TATTCCTTTG ATTATGAATT AGGATACTTA ACATCAAATA TAAAAAATTT AGGAACAGCT TTAAGAGCAA AGGTATTTAT ACACTTACCT CTTTTAAGTT CAAATAATTT AATAAGAATA ATAAAAAATG CTCTAAAGGA AGAAGGAATT ACTCTAAAGA GTATATACAA TTCAGGAAAT AAAGATGTTG GCAATATTTA TGAAGTATCT AATATTAAGA CTTTAGGAAT GTCAGAAAAA GATATTTTAG ATTCTCTTAT ATCTATTACT AATAAATTAA TTTTAAGAGA GAAAAACCAA AGAGATAATC TTTCAAAGGA TGAGTATATT GAATTAAAAG ATGATATTTT AAGAGCATTA GGAGTTTTGA GAAATACCTA TTCAATAGAT AGGGATGAAG CTTTAAAATA TTTATCTTAT GTAAGGTTAG GAGTTGAGCT AGGCATTATA GAAGATCTTA CTTTAAAATC AGTAAATTCT GCTATGATTG AAATTCAACC TGATATGATA AATAACTCAT CGATTAAAAA GAGAGATATA CAAAGTTTAA AAATAGAAAG AGCCAAAATT ATTAGAAATG CTTTAAACAC ATAA
- length
- 1014
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.