Allele information - CPF_RS13435: 16
Provenance/meta data
- locus
- CPF_RS13435
- allele
- 16
- sequence
- GTGGTTCAAT GGATTAGCTC CTTAGATAAT AGTATAGTAA TTGCATCAAA AGTTAAAATC TTAAGAAACA TAAAAGGAAT TAAATTCACT AAGATGTTAA ATGAAGAGGA ATTTAATAAT CTTTCAAGTA TGGTTTTAGG ACACTTGAAA GAAGTTGATA TTTTGGATAA ATGTTATGTA GTTAAATTAA AAGACGGTGA AGAAAAAATA ATAGATTACT ACAAAGAAAA TTTTGGCTTA ATAAAATACT TTGAAAATAA GGATAATCTT ATTTTTATAA TGAATAAAAG TGGAGAATTT AATATATTAC TGAATGAAGA AGAGCATATT GGGATAGAAT GTACAAATAG TGGATTAAGT TTAAGAGAAG TGTATTCTAA GGTAGATAAA TTAGATGACT TAATTGAAGA AAAAATACAC TATTCCTTTG ATTCTGAATT AGGATACTTA ACATCAAATA TAAAAAATCT AGGAACAGCT TTAAGAGCAA AGGTATTTAT ACACTTACCT CTTTTAAGTT CAAATAATTT AATAAGAATA ATAAAAAATG CTCTAAAGGA AGAAGGAATT ACTCTAAAGA GTATATATAA TTCAGGAAAT AAAGATGTTG GCAATATTTA TGAAGTATCT AATATTAAGA CTTTAGAAAT GTCAGAAAAA GATATTTTAG ATTCTCTTAT ATCTATTACT AATAAATTAA TTTTAAGAGA GAAAAACCAA AGAGATAATC TTTCAGAGGA TGAGTATATT GAATTAAAAG AGGATATTTT AAGAGCCTTA GGAGTTTTGA GAAATACCTA TTCAATAGAT AGGGATGAAG CTTTAAAATA TTTATCTTAT GTAAGGTTAG GAGTTGAGCT AGACATTATA GAAGATCTTA GTTTAAAATC AGTAAATTCT GCTATGATTG AAATTCAACC TGATATGATA AATAACTCAT CAATTAAAAA GAGAGATATA CAAAGTTTAA AAATAGAAAG GGCCAAAATT ATTAGAAATG CTTTAAACAC ATAA
- length
- 1014
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.