Allele information - CPF_RS11825: 8
Provenance/meta data
- locus
- CPF_RS11825
- allele
- 8
- sequence
- ATGGACAATA TAAATCATAT TTTATCAAAG GAACTTGGTA TTTCATTAAA ACAGGTAACA AGTGTTATAG AGATGTTAGA TGAAGGAAAT ACGGTACCTT TCATAGCTAG ATATAGAAAA GAAAGAACTG GTGGATTAAC AGATGAGGTT CTAAGAAAAT TTAATGAGAG ATTAACATAT CTAAGAAATT TAGAAAGTAG AAAAGAAGAT GTTTTAAGAA TAATAGAGGA GCAAGAAAAA TTAACTCCAG AATTAAAATT AAAAATTGAG AAAGCTAATA CTCTTACTGA GGTTGAAGAT ATATATAGAC CTTTTAAAGC TAAAAAGAGA ACAAGAGCTA CTATGGCTAT TGAAAAGGGA TTAAAGCCAT TAGCAGAGCT TATTTTATCA GGAGAGTTTA ATGGTGATAT AGTAGAAGAG GCTAATAAAT ATATTAATGA AGAAAAAGGT GTTAAAAATG AAGAGGAAGC TCTTCAAGGG GCTATGGATA TTATAAGTGA AATAATATCT GATAATGCTG ATTATAGAAA ATGGATTAGA AATTTTGTTC AAAAGGATGG AATAATTCAG GTAAAAGGAA GCAGTGAAGA ACAAACACCT TATGAAATGT ATTATGATTA TAAGGAACCT GTTAGAACAA TTCCATCTCA TAGAATATTA GCTATAAATA GAGGAGAAAA GGAAAAAATT CTTTCTGTTA AAGTAACTTG TAATGATGAT AAAATTATAG ATTATTTAAA TAAAAAAGTT TTAAAGGGAA ATAAAATTAC TGATAAGTAT TTAGAAGAAA GTATAAAGGA CTCCTTTAAA AGACTTATAT ATCCTTCAAT AGAAAGGGAA ATAAGAAGTG AATTAACCTC TAAGGGAGAA GAGGGAGCAA TTGATATATT TAAGGCTAAT TTAAAAGCTC TCTTAATGCA AGCTCCTATT AAGGGAAAAG TTGTAATGGG ATTTGACCCA GGGTTTAGAA CAGGATGTAA GGTAGCAATC TTAGATGAAA CAGGAAAATT TGTTGAGAAT ACAACTGTTT ATCCAACAGC CCCTCAAAAT AGAATTGATG AAACAATAAG TACACTTAAA AAACTTATTA AAAAACATGG AGTTCAAGTT ATTTCTTTAG GAAATGGAAC AGCTTCAAGA GAATCAGAAG AAGTAATTGC AAAGATGCTT AAGGAAATAA AAGATGAAAC AGGAAAAGAA TTATTTTATG TTATAGTTTC TGAGGCAGGA GCTTCTGTTT ATTCAGCATC AGAACTTGCA AATAAGGAAT ATCCAGACTT AGATGTAACT GTAAGAGGAG CAATTTCTAT AGGAAGAAGA CTTCAAGATC CATTAGCTGA GCTTGTTAAA ATAGATCCTA AGGCTATAGG AGTAGGACAA TATCAACATG ATGTAACTCA GAAAAAACTT GATGAATCCT TAGCAGGGAT AGTTGAGGAT TGTGTTAATA ATGTAGGAGT AGATTTAAAT ATAGCAACTC CATCATTATT AAGTTATATT TCAGGAATAA ATGCTTCAAT AGCTAAAAAT ATTGTTGATT ATAGAGAAGA AAATGGTAAG TTTAAAAGTA GAAAAGAGCT TTTAAAAGTT AAAAGATTAG GACAAAAAGC TTATGAACAA TGTGCAGGAT TCTTAAGAGT TATGGAAAGC AAAGAAGCTT TAGATAATAC TTCAGTTCAT CCAGAGTCAT ATAAAGTAGC TAAGGAACTT ATAAAAACTT TAGGATATAC AGAAGAAGAT TTAAAAAATG GCAAATTAGT AGATATAGAT GAGAGAGTAA AAGCAAAAGG AATTTCTAAC TTAGCAAAAG AATTAGAAGT TGGAGAACCA ACACTTAATG ATATTATAAA GGAAATTAAA AAGCCTGGAA GAGATCCAAG AGAGGAATTA CCTAAACCAA TATTTAAGTC TGGCGTAATA GAAATGAAAG ATTTAAAACC AGGTATGATT TTAATGGGGA CAGTTAGAAA TGTATCTGAT TTTGGTGCTT TTGTAGATAT TGGAGTTCAC CAAGATGGAT TAGTTCATAA GAGCCAAATG GCAGATAGAT TTGTTAAACA TCCACTTGAT ATAGTTAAGG TTGGAGATGT AGTAGAAGTT AGAATATTAG ATGTTGATTT AAAAAGAAAG AGAATTTCAT TATCAATGAA AAAAGAAGGT TAA
- length
- 2163
- status
- WGS: automated extract (BIGSdb)
- date entered
- 2020-10-26
- datestamp
- 2020-10-26
- sender
- Auto Definer
- curator
- Auto Definer, PubMLST (automated assignment script)
Profiles containing this allele
- cgMLST
Isolate databases
- PubMLST isolates
- Contains data for a collection of isolates that represent the total known diversity of Clostridium perfringens. For every allelic profile in the profiles database there should be at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.